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NAXD (NAD(P)HX dehydratase)

Identity

Alias (NCBI)CARKD
LP3298
PEBEL2
HGNC (Hugo) NAXD
HGNC Alias symbLP3298
FLJ10769
HGNC Alias nameATP-dependent NAD(P)H-hydrate dehydratase
HGNC Previous nameCARKD
HGNC Previous namecarbohydrate kinase domain containing
LocusID (NCBI) 55739
Atlas_Id 58151
Location 13q34  [Link to chromosome band 13q34]
Location_base_pair Starts at 110615628 and ends at 110639995 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

 

Nomenclature
HGNC (Hugo)NAXD   25576
Cards
Entrez_Gene (NCBI)NAXD    NAD(P)HX dehydratase
AliasesCARKD; LP3298; PEBEL2
GeneCards (Weizmann)NAXD
Ensembl hg19 (Hinxton)ENSG00000213995 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000213995 [Gene_View]  ENSG00000213995 [Sequence]  chr13:110615628-110639995 [Contig_View]  NAXD [Vega]
ICGC DataPortalENSG00000213995
TCGA cBioPortalNAXD
AceView (NCBI)NAXD
Genatlas (Paris)NAXD
SOURCE (Princeton)NAXD
Genetics Home Reference (NIH)NAXD
Genomic and cartography
GoldenPath hg38 (UCSC)NAXD  -     chr13:110615628-110639995 +  13q34   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)NAXD  -     13q34   [Description]    (hg19-Feb_2009)
GoldenPathNAXD - 13q34 [CytoView hg19]  NAXD - 13q34 [CytoView hg38]
ImmunoBaseENSG00000213995
Genome Data Viewer NCBINAXD [Mapview hg19]  
OMIM615910   618321   
Gene and transcription
Genbank (Entrez)AF091088 AF151071 AK001631 AK024260 AK057767
RefSeq transcript (Entrez)NM_001242881 NM_001242882 NM_001242883 NM_018210
Consensus coding sequences : CCDS (NCBI)NAXD
Gene ExpressionNAXD [ NCBI-GEO ]   NAXD [ EBI - ARRAY_EXPRESS ]   NAXD [ SEEK ]   NAXD [ MEM ]
Gene Expression Viewer (FireBrowse)NAXD [ Firebrowse - Broad ]
GenevisibleExpression of NAXD in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)55739
GTEX Portal (Tissue expression)NAXD
Human Protein AtlasENSG00000213995-NAXD [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8IW45   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8IW45  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8IW45
PhosPhoSitePlusQ8IW45
Domaine pattern : Prosite (Expaxy)YJEF_C_3 (PS51383)   
Domains : Interpro (EBI)CARKD    Ribokinase-like   
Domain families : Pfam (Sanger)Carb_kinase (PF01256)   
Domain families : Pfam (NCBI)pfam01256   
Conserved Domain (NCBI)NAXD
SuperfamilyQ8IW45
AlphaFold pdb e-kbQ8IW45   
Human Protein Atlas [tissue]ENSG00000213995-NAXD [tissue]
Protein Interaction databases
DIP (DOE-UCLA)Q8IW45
IntAct (EBI)Q8IW45
BioGRIDNAXD
STRING (EMBL)NAXD
ZODIACNAXD
Ontologies - Pathways
QuickGOQ8IW45
Ontology : AmiGOprotein binding  ATP binding  cellular_component  mitochondrial matrix  biological_process  NAD biosynthesis via nicotinamide riboside salvage pathway  ATP-dependent NAD(P)H-hydrate dehydratase activity  ATP-dependent NAD(P)H-hydrate dehydratase activity  ADP-dependent NAD(P)H-hydrate dehydratase activity  metabolite repair  
Ontology : EGO-EBIprotein binding  ATP binding  cellular_component  mitochondrial matrix  biological_process  NAD biosynthesis via nicotinamide riboside salvage pathway  ATP-dependent NAD(P)H-hydrate dehydratase activity  ATP-dependent NAD(P)H-hydrate dehydratase activity  ADP-dependent NAD(P)H-hydrate dehydratase activity  metabolite repair  
NDEx NetworkNAXD
Atlas of Cancer Signalling NetworkNAXD
Wikipedia pathwaysNAXD
Orthology - Evolution
OrthoDB55739
GeneTree (enSembl)ENSG00000213995
Phylogenetic Trees/Animal Genes : TreeFamNAXD
Homologs : HomoloGeneNAXD
Homology/Alignments : Family Browser (UCSC)NAXD
Gene fusions - Rearrangements
Fusion : QuiverNAXD
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerNAXD [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)NAXD
dbVarNAXD
ClinVarNAXD
MonarchNAXD
1000_GenomesNAXD 
Exome Variant ServerNAXD
GNOMAD BrowserENSG00000213995
Varsome BrowserNAXD
ACMGNAXD variants
VarityQ8IW45
Genomic Variants (DGV)NAXD [DGVbeta]
DECIPHERNAXD [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisNAXD 
Mutations
ICGC Data PortalNAXD 
TCGA Data PortalNAXD 
Broad Tumor PortalNAXD
OASIS PortalNAXD [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICNAXD  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DNAXD
Mutations and Diseases : HGMDNAXD
LOVD (Leiden Open Variation Database)[gene] [transcripts] [variants]
BioMutaNAXD
DgiDB (Drug Gene Interaction Database)NAXD
DoCM (Curated mutations)NAXD
CIViC (Clinical Interpretations of Variants in Cancer)NAXD
Cancer3DNAXD
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM615910    618321   
Orphanet
DisGeNETNAXD
MedgenNAXD
Genetic Testing Registry NAXD
NextProtQ8IW45 [Medical]
GENETestsNAXD
Target ValidationNAXD
Huge Navigator NAXD [HugePedia]
ClinGenNAXD
Clinical trials, drugs, therapy
MyCancerGenomeNAXD
Protein Interactions : CTDNAXD
Pharm GKB GenePA164717652
PharosQ8IW45
Clinical trialNAXD
Miscellaneous
canSAR (ICR)NAXD
HarmonizomeNAXD
DataMed IndexNAXD
Probes
Litterature
PubMed21 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXNAXD
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Oct 4 15:22:06 CEST 2021

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