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NAXD (NAD(P)HX dehydratase)

Identity

Alias_namesCARKD
carbohydrate kinase domain containing
Alias_symbol (synonym)LP3298
FLJ10769
Other alias
HGNC (Hugo) NAXD
LocusID (NCBI) 55739
Atlas_Id 78363
Location 13q34  [Link to chromosome band 13q34]
Location_base_pair Starts at 110615584 and ends at 110639995 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)NAXD   25576
Cards
Entrez_Gene (NCBI)NAXD  55739  NAD(P)HX dehydratase
AliasesCARKD; LP3298
GeneCards (Weizmann)NAXD
Ensembl hg19 (Hinxton)ENSG00000213995 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000213995 [Gene_View]  chr13:110615584-110639995 [Contig_View]  NAXD [Vega]
ICGC DataPortalENSG00000213995
TCGA cBioPortalNAXD
AceView (NCBI)NAXD
Genatlas (Paris)NAXD
WikiGenes55739
SOURCE (Princeton)NAXD
Genetics Home Reference (NIH)NAXD
Genomic and cartography
GoldenPath hg38 (UCSC)NAXD  -     chr13:110615584-110639995 +  13q34   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)NAXD  -     13q34   [Description]    (hg19-Feb_2009)
EnsemblNAXD - 13q34 [CytoView hg19]  NAXD - 13q34 [CytoView hg38]
Mapping of homologs : NCBINAXD [Mapview hg19]  NAXD [Mapview hg38]
OMIM615910   
Gene and transcription
Genbank (Entrez)AF091088 AF151071 AK001631 AK024260 AK057767
RefSeq transcript (Entrez)NM_001242881 NM_001242882 NM_001242883 NM_018210
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)NAXD
Cluster EST : UnigeneHs.408324 [ NCBI ]
CGAP (NCI)Hs.408324
Alternative Splicing GalleryENSG00000213995
Gene ExpressionNAXD [ NCBI-GEO ]   NAXD [ EBI - ARRAY_EXPRESS ]   NAXD [ SEEK ]   NAXD [ MEM ]
Gene Expression Viewer (FireBrowse)NAXD [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)55739
GTEX Portal (Tissue expression)NAXD
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8IW45   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8IW45  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8IW45
Splice isoforms : SwissVarQ8IW45
PhosPhoSitePlusQ8IW45
Domaine pattern : Prosite (Expaxy)YJEF_C_3 (PS51383)   
Domains : Interpro (EBI)CARKD    Ribokinase-like   
Domain families : Pfam (Sanger)Carb_kinase (PF01256)   
Domain families : Pfam (NCBI)pfam01256   
Conserved Domain (NCBI)NAXD
DMDM Disease mutations55739
Blocks (Seattle)NAXD
SuperfamilyQ8IW45
Human Protein AtlasENSG00000213995
Peptide AtlasQ8IW45
HPRD07698
IPIIPI00873027   IPI00645172   IPI00908636   IPI00910136   IPI00909495   IPI00922893   IPI00867692   IPI00000892   IPI00985473   
Protein Interaction databases
DIP (DOE-UCLA)Q8IW45
IntAct (EBI)Q8IW45
FunCoupENSG00000213995
BioGRIDNAXD
STRING (EMBL)NAXD
ZODIACNAXD
Ontologies - Pathways
QuickGOQ8IW45
Ontology : AmiGOmolecular_function  protein binding  ATP binding  cellular_component  mitochondrial matrix  biological_process  NAD biosynthesis via nicotinamide riboside salvage pathway  ATP-dependent NAD(P)H-hydrate dehydratase activity  ADP-dependent NAD(P)H-hydrate dehydratase activity  
Ontology : EGO-EBImolecular_function  protein binding  ATP binding  cellular_component  mitochondrial matrix  biological_process  NAD biosynthesis via nicotinamide riboside salvage pathway  ATP-dependent NAD(P)H-hydrate dehydratase activity  ADP-dependent NAD(P)H-hydrate dehydratase activity  
NDEx NetworkNAXD
Atlas of Cancer Signalling NetworkNAXD
Wikipedia pathwaysNAXD
Orthology - Evolution
OrthoDB55739
GeneTree (enSembl)ENSG00000213995
Phylogenetic Trees/Animal Genes : TreeFamNAXD
HOVERGENQ8IW45
HOGENOMQ8IW45
Homologs : HomoloGeneNAXD
Homology/Alignments : Family Browser (UCSC)NAXD
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerNAXD [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)NAXD
dbVarNAXD
ClinVarNAXD
1000_GenomesNAXD 
Exome Variant ServerNAXD
ExAC (Exome Aggregation Consortium)NAXD (select the gene name)
Genetic variants : HAPMAP55739
Genomic Variants (DGV)NAXD [DGVbeta]
DECIPHERNAXD [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisNAXD 
Mutations
ICGC Data PortalNAXD 
TCGA Data PortalNAXD 
Broad Tumor PortalNAXD
OASIS PortalNAXD [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDNAXD
BioMutasearch NAXD
DgiDB (Drug Gene Interaction Database)NAXD
DoCM (Curated mutations)NAXD (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)NAXD (select a term)
intoGenNAXD
Cancer3DNAXD(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM615910   
Orphanet
MedgenNAXD
Genetic Testing Registry NAXD
NextProtQ8IW45 [Medical]
TSGene55739
GENETestsNAXD
Target ValidationNAXD
Huge Navigator NAXD [HugePedia]
snp3D : Map Gene to Disease55739
BioCentury BCIQNAXD
ClinGenNAXD
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD55739
Chemical/Pharm GKB GenePA164717652
Clinical trialNAXD
Miscellaneous
canSAR (ICR)NAXD (select the gene name)
Probes
Litterature
PubMed15 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineNAXD
EVEXNAXD
GoPubMedNAXD
iHOPNAXD
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:31:46 CEST 2017

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