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NBAT1 (neuroblastoma associated transcript 1)

Identity

Alias (NCBI)CASC14
NBAT-1
HGNC (Hugo) NBAT1
HGNC Alias symbNBAT-1
HGNC Alias nameneuroblastoma associated transcript-1
HGNC Previous nameCASC14
HGNC Previous namecancer susceptibility candidate 14 (non-protein coding)
LocusID (NCBI) 729177
Atlas_Id 53508
Location 6p22.3  [Link to chromosome band 6p22]
Location_base_pair Starts at 22134602 and ends at 22147193 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

Nomenclature
HGNC (Hugo)NBAT1   49075
Cards
Entrez_Gene (NCBI)NBAT1    neuroblastoma associated transcript 1
AliasesCASC14; NBAT-1
GeneCards (Weizmann)NBAT1
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]   [Sequence]  chr6:22134602-22147193 [Contig_View]  NBAT1 [Vega]
TCGA cBioPortalNBAT1
AceView (NCBI)NBAT1
Genatlas (Paris)NBAT1
SOURCE (Princeton)NBAT1
Genetics Home Reference (NIH)NBAT1
Genomic and cartography
GoldenPath hg38 (UCSC)NBAT1  -     chr6:22134602-22147193 -  6p22.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)NBAT1  -     6p22.3   [Description]    (hg19-Feb_2009)
GoldenPathNBAT1 - 6p22.3 [CytoView hg19]  NBAT1 - 6p22.3 [CytoView hg38]
Genome Data Viewer NCBINBAT1 [Mapview hg19]  
OMIM616206   
Gene and transcription
Genbank (Entrez)AK126168 H15083 OA988555
RefSeq transcript (Entrez)
Consensus coding sequences : CCDS (NCBI)NBAT1
Gene ExpressionNBAT1 [ NCBI-GEO ]   NBAT1 [ EBI - ARRAY_EXPRESS ]   NBAT1 [ SEEK ]   NBAT1 [ MEM ]
Gene Expression Viewer (FireBrowse)NBAT1 [ Firebrowse - Broad ]
GenevisibleExpression of NBAT1 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)729177
GTEX Portal (Tissue expression)NBAT1
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)NBAT1
Protein Interaction databases
BioGRIDNBAT1
STRING (EMBL)NBAT1
ZODIACNBAT1
Ontologies - Pathways
Litterature
PubMed14 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXNBAT1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Oct 4 15:22:06 CEST 2021

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