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NBAT1 (neuroblastoma associated transcript 1)

Identity

Alias_namesCASC14
cancer susceptibility candidate 14 (non-protein coding)
Alias_symbol (synonym)NBAT-1
Other alias
HGNC (Hugo) NBAT1
LocusID (NCBI) 729177
Atlas_Id 53508
Location 6p22.3  [Link to chromosome band 6p22]
Location_base_pair Starts at 22134602 and ends at 22147193 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)NBAT1   49075
Cards
Entrez_Gene (NCBI)NBAT1  729177  neuroblastoma associated transcript 1
AliasesCASC14; NBAT-1
GeneCards (Weizmann)NBAT1
Ensembl hg19 (Hinxton)ENSG00000260455 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000260455 [Gene_View]  chr6:22134602-22147193 [Contig_View]  NBAT1 [Vega]
ICGC DataPortalENSG00000260455
TCGA cBioPortalNBAT1
AceView (NCBI)NBAT1
Genatlas (Paris)NBAT1
WikiGenes729177
SOURCE (Princeton)NBAT1
Genetics Home Reference (NIH)NBAT1
Genomic and cartography
GoldenPath hg38 (UCSC)NBAT1  -     chr6:22134602-22147193 -  6p22.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)NBAT1  -     6p22.3   [Description]    (hg19-Feb_2009)
EnsemblNBAT1 - 6p22.3 [CytoView hg19]  NBAT1 - 6p22.3 [CytoView hg38]
Mapping of homologs : NCBINBAT1 [Mapview hg19]  NBAT1 [Mapview hg38]
OMIM616206   
Gene and transcription
Genbank (Entrez)AK126168 H15083
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)NBAT1
Cluster EST : UnigeneHs.730673 [ NCBI ]
CGAP (NCI)Hs.730673
Alternative Splicing GalleryENSG00000260455
Gene ExpressionNBAT1 [ NCBI-GEO ]   NBAT1 [ EBI - ARRAY_EXPRESS ]   NBAT1 [ SEEK ]   NBAT1 [ MEM ]
Gene Expression Viewer (FireBrowse)NBAT1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)729177
GTEX Portal (Tissue expression)NBAT1
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)NBAT1
DMDM Disease mutations729177
Blocks (Seattle)NBAT1
Human Protein AtlasENSG00000260455
Protein Interaction databases
FunCoupENSG00000260455
BioGRIDNBAT1
STRING (EMBL)NBAT1
ZODIACNBAT1
Ontologies - Pathways
Huge Navigator NBAT1 [HugePedia]
snp3D : Map Gene to Disease729177
BioCentury BCIQNBAT1
ClinGenNBAT1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD729177
Clinical trialNBAT1
Miscellaneous
canSAR (ICR)NBAT1 (select the gene name)
Probes
Litterature
PubMed7 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineNBAT1
EVEXNBAT1
GoPubMedNBAT1
iHOPNBAT1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Sep 25 19:21:27 CEST 2017

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