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NBPF8 (NBPF member 8)

Identity

Alias (NCBI)NBPF8P
HGNC (Hugo) NBPF8
HGNC Previous nameNBPF8P
HGNC Previous nameneuroblastoma breakpoint family, member 8, pseudogene
LocusID (NCBI) 728841
Atlas_Id 56450
Location 1p11.2  [Link to chromosome band 1p11]
Location_base_pair Starts at 120415027 and ends at 120469670 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

 

Nomenclature
HGNC (Hugo)NBPF8   31990
Cards
Entrez_Gene (NCBI)NBPF8    NBPF member 8
AliasesNBPF8P
GeneCards (Weizmann)NBPF8
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]   [Sequence]  chr1:120415027-120469670 [Contig_View]  NBPF8 [Vega]
TCGA cBioPortalNBPF8
AceView (NCBI)NBPF8
Genatlas (Paris)NBPF8
SOURCE (Princeton)NBPF8
Genetics Home Reference (NIH)NBPF8
Genomic and cartography
GoldenPath hg38 (UCSC)NBPF8  -     chr1:120415027-120469670 +  1p11.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)NBPF8  -     1p11.2   [Description]    (hg19-Feb_2009)
GoldenPathNBPF8 - 1p11.2 [CytoView hg19]  NBPF8 - 1p11.2 [CytoView hg38]
Genome Data Viewer NCBINBPF8 [Mapview hg19]  
OMIM613998   
Gene and transcription
Genbank (Entrez)AK300749 AK307809 AK308678 AY894561 AY894562
RefSeq transcript (Entrez)NM_001037501
Consensus coding sequences : CCDS (NCBI)NBPF8
Gene ExpressionNBPF8 [ NCBI-GEO ]   NBPF8 [ EBI - ARRAY_EXPRESS ]   NBPF8 [ SEEK ]   NBPF8 [ MEM ]
Gene Expression Viewer (FireBrowse)NBPF8 [ Firebrowse - Broad ]
GenevisibleExpression of NBPF8 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)728841
GTEX Portal (Tissue expression)NBPF8
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ3BBV2   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ3BBV2  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ3BBV2
PhosPhoSitePlusQ3BBV2
Domaine pattern : Prosite (Expaxy)ODV (PS51316)   
Domains : Interpro (EBI)Olduvai_dom   
Domain families : Pfam (Sanger)Olduvai (PF06758)   
Domain families : Pfam (NCBI)pfam06758   
Domain families : Smart (EMBL)DUF1220 (SM01148)  
Conserved Domain (NCBI)NBPF8
SuperfamilyQ3BBV2
AlphaFold pdb e-kbQ3BBV2   
Protein Interaction databases
DIP (DOE-UCLA)Q3BBV2
IntAct (EBI)Q3BBV2
BioGRIDNBPF8
STRING (EMBL)NBPF8
ZODIACNBPF8
Ontologies - Pathways
QuickGOQ3BBV2
Ontology : AmiGOcytoplasm  
Ontology : EGO-EBIcytoplasm  
NDEx NetworkNBPF8
Atlas of Cancer Signalling NetworkNBPF8
Wikipedia pathwaysNBPF8
Orthology - Evolution
OrthoDB728841
Phylogenetic Trees/Animal Genes : TreeFamNBPF8
Homologs : HomoloGeneNBPF8
Homology/Alignments : Family Browser (UCSC)NBPF8
Gene fusions - Rearrangements
Fusion : QuiverNBPF8
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerNBPF8 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)NBPF8
dbVarNBPF8
ClinVarNBPF8
MonarchNBPF8
1000_GenomesNBPF8 
Exome Variant ServerNBPF8
Varsome BrowserNBPF8
ACMGNBPF8 variants
VarityQ3BBV2
Genomic Variants (DGV)NBPF8 [DGVbeta]
DECIPHERNBPF8 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisNBPF8 
Mutations
ICGC Data PortalNBPF8 
TCGA Data PortalNBPF8 
Broad Tumor PortalNBPF8
OASIS PortalNBPF8 [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDNBPF8
LOVD (Leiden Open Variation Database)[gene] [transcripts] [variants]
BioMutaNBPF8
DgiDB (Drug Gene Interaction Database)NBPF8
DoCM (Curated mutations)NBPF8
CIViC (Clinical Interpretations of Variants in Cancer)NBPF8
Cancer3DNBPF8
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM613998   
Orphanet
DisGeNETNBPF8
MedgenNBPF8
Genetic Testing Registry NBPF8
NextProtQ3BBV2 [Medical]
GENETestsNBPF8
Target ValidationNBPF8
Huge Navigator NBPF8 [HugePedia]
ClinGenNBPF8
Clinical trials, drugs, therapy
MyCancerGenomeNBPF8
Protein Interactions : CTDNBPF8
Pharm GKB GenePA142671288
PharosQ3BBV2
Clinical trialNBPF8
Miscellaneous
canSAR (ICR)NBPF8
HarmonizomeNBPF8
DataMed IndexNBPF8
Probes
Litterature
PubMed8 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXNBPF8
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

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indexed on : Mon Oct 4 15:22:12 CEST 2021

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