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NBPF8 (NBPF member 8)

Identity

Alias_namesNBPF8P
neuroblastoma breakpoint family, member 8, pseudogene
neuroblastoma breakpoint family, member 8
Other alias
HGNC (Hugo) NBPF8
LocusID (NCBI) 728841
Atlas_Id 56450
Location 1p11.2  [Link to chromosome band 1p11]
Location_base_pair Starts at 120436351 and ends at 120467844 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)NBPF8   31990
Cards
Entrez_Gene (NCBI)NBPF8  728841  NBPF member 8
AliasesNBPF8P
GeneCards (Weizmann)NBPF8
Ensembl hg19 (Hinxton)ENSG00000270231 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000270231 [Gene_View]  chr1:120436351-120467844 [Contig_View]  NBPF8 [Vega]
ICGC DataPortalENSG00000270231
TCGA cBioPortalNBPF8
AceView (NCBI)NBPF8
Genatlas (Paris)NBPF8
WikiGenes728841
SOURCE (Princeton)NBPF8
Genetics Home Reference (NIH)NBPF8
Genomic and cartography
GoldenPath hg38 (UCSC)NBPF8  -     chr1:120436351-120467844 +  1p11.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)NBPF8  -     1p11.2   [Description]    (hg19-Feb_2009)
EnsemblNBPF8 - 1p11.2 [CytoView hg19]  NBPF8 - 1p11.2 [CytoView hg38]
Mapping of homologs : NCBINBPF8 [Mapview hg19]  NBPF8 [Mapview hg38]
OMIM613998   
Gene and transcription
Genbank (Entrez)AK300749 AK307809 AK308678 AY894561 AY894562
RefSeq transcript (Entrez)NM_001037501
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)NBPF8
Cluster EST : UnigeneHs.721588 [ NCBI ]
CGAP (NCI)Hs.721588
Alternative Splicing GalleryENSG00000270231
Gene ExpressionNBPF8 [ NCBI-GEO ]   NBPF8 [ EBI - ARRAY_EXPRESS ]   NBPF8 [ SEEK ]   NBPF8 [ MEM ]
Gene Expression Viewer (FireBrowse)NBPF8 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)728841
GTEX Portal (Tissue expression)NBPF8
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ3BBV2   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ3BBV2  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ3BBV2
Splice isoforms : SwissVarQ3BBV2
PhosPhoSitePlusQ3BBV2
Domaine pattern : Prosite (Expaxy)NBPF (PS51316)   
Domains : Interpro (EBI)NBPF_dom   
Domain families : Pfam (Sanger)DUF1220 (PF06758)   
Domain families : Pfam (NCBI)pfam06758   
Domain families : Smart (EMBL)DUF1220 (SM01148)  
Conserved Domain (NCBI)NBPF8
DMDM Disease mutations728841
Blocks (Seattle)NBPF8
SuperfamilyQ3BBV2
Human Protein AtlasENSG00000270231
Peptide AtlasQ3BBV2
Protein Interaction databases
DIP (DOE-UCLA)Q3BBV2
IntAct (EBI)Q3BBV2
FunCoupENSG00000270231
BioGRIDNBPF8
STRING (EMBL)NBPF8
ZODIACNBPF8
Ontologies - Pathways
QuickGOQ3BBV2
Ontology : AmiGOcytoplasm  oxidoreductase activity  oxidation-reduction process  
Ontology : EGO-EBIcytoplasm  oxidoreductase activity  oxidation-reduction process  
NDEx NetworkNBPF8
Atlas of Cancer Signalling NetworkNBPF8
Wikipedia pathwaysNBPF8
Orthology - Evolution
OrthoDB728841
GeneTree (enSembl)ENSG00000270231
Phylogenetic Trees/Animal Genes : TreeFamNBPF8
HOVERGENQ3BBV2
HOGENOMQ3BBV2
Homologs : HomoloGeneNBPF8
Homology/Alignments : Family Browser (UCSC)NBPF8
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerNBPF8 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)NBPF8
dbVarNBPF8
ClinVarNBPF8
1000_GenomesNBPF8 
Exome Variant ServerNBPF8
ExAC (Exome Aggregation Consortium)NBPF8 (select the gene name)
Genetic variants : HAPMAP728841
Genomic Variants (DGV)NBPF8 [DGVbeta]
DECIPHERNBPF8 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisNBPF8 
Mutations
ICGC Data PortalNBPF8 
TCGA Data PortalNBPF8 
Broad Tumor PortalNBPF8
OASIS PortalNBPF8 [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDNBPF8
BioMutasearch NBPF8
DgiDB (Drug Gene Interaction Database)NBPF8
DoCM (Curated mutations)NBPF8 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)NBPF8 (select a term)
intoGenNBPF8
Cancer3DNBPF8(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM613998   
Orphanet
MedgenNBPF8
Genetic Testing Registry NBPF8
NextProtQ3BBV2 [Medical]
TSGene728841
GENETestsNBPF8
Target ValidationNBPF8
Huge Navigator NBPF8 [HugePedia]
snp3D : Map Gene to Disease728841
BioCentury BCIQNBPF8
ClinGenNBPF8
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD728841
Chemical/Pharm GKB GenePA142671288
Clinical trialNBPF8
Miscellaneous
canSAR (ICR)NBPF8 (select the gene name)
Probes
Litterature
PubMed5 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineNBPF8
EVEXNBPF8
GoPubMedNBPF8
iHOPNBPF8
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

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indexed on : Tue Aug 1 17:08:45 CEST 2017

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