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NBPF9 (NBPF member 9)

Identity

Alias (NCBI)AE01
HGNC (Hugo) NBPF9
HGNC Alias symbAE01
HGNC Previous nameneuroblastoma breakpoint family, member 9
LocusID (NCBI) 400818
Atlas_Id 56241
Location 1q21.2  [Link to chromosome band 1q21]
Location_base_pair Starts at 149054033 and ends at 149082311 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
HDAC4 (2q37.3) / NBPF9 (1q21.1)NBPF9 (1q21.1) / DPYD (1p21.3)NBPF9 (1q21.1) / HMG20B (19p13.3)
NBPF9 (1q21.1) / INTS3 (1q21.3)NBPF9 (1q21.1) / NBPF11 (1q21.1)NBPF9 (1q21.1) / NBPF14 (1q21.2)
NBPF9 (1q21.1) / NBPF9 (1q21.1)NBPF9 (1q21.1) / ST7 (7q31.2)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

Nomenclature
HGNC (Hugo)NBPF9   31991
Cards
Entrez_Gene (NCBI)NBPF9    NBPF member 9
AliasesAE01
GeneCards (Weizmann)NBPF9
Ensembl hg19 (Hinxton)ENSG00000269713 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000269713 [Gene_View]  ENSG00000269713 [Sequence]  chr1:149054033-149082311 [Contig_View]  NBPF9 [Vega]
ICGC DataPortalENSG00000269713
TCGA cBioPortalNBPF9
AceView (NCBI)NBPF9
Genatlas (Paris)NBPF9
SOURCE (Princeton)NBPF9
Genetics Home Reference (NIH)NBPF9
Genomic and cartography
GoldenPath hg38 (UCSC)NBPF9  -     chr1:149054033-149082311 -  1q21.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)NBPF9  -     1q21.2   [Description]    (hg19-Feb_2009)
GoldenPathNBPF9 - 1q21.2 [CytoView hg19]  NBPF9 - 1q21.2 [CytoView hg38]
ImmunoBaseENSG00000269713
Genome Data Viewer NCBINBPF9 [Mapview hg19]  
OMIM613999   
Gene and transcription
Genbank (Entrez)AH012397 AK095030 AK294414 AY894574 BC071995
RefSeq transcript (Entrez)NM_001037675 NM_001277444 NM_001388366 NM_001388367 NM_001388368 NM_001388369 NM_001388370 NM_001388371 NM_001388372 NM_001388373 NM_001388374 NM_001388375 NM_001388376 NM_001388377 NM_001388378 NM_001388379 NM_001388381 NM_001388382 NM_001388383 NM_001388384
Consensus coding sequences : CCDS (NCBI)NBPF9
Gene ExpressionNBPF9 [ NCBI-GEO ]   NBPF9 [ EBI - ARRAY_EXPRESS ]   NBPF9 [ SEEK ]   NBPF9 [ MEM ]
Gene Expression Viewer (FireBrowse)NBPF9 [ Firebrowse - Broad ]
GenevisibleExpression of NBPF9 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)400818
GTEX Portal (Tissue expression)NBPF9
Human Protein AtlasENSG00000269713-NBPF9 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)NBPF9
Human Protein Atlas [tissue]ENSG00000269713-NBPF9 [tissue]
Protein Interaction databases
BioGRIDNBPF9
STRING (EMBL)NBPF9
ZODIACNBPF9
Ontologies - Pathways
Litterature
PubMed7 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXNBPF9
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Oct 4 15:22:12 CEST 2021

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