NBR1 (NBR1 autophagy cargo receptor)

2003-02-01  

Identity

HGNC
NBR1
LOCATION
17q21.31
LOCUSID
4077
ALIAS
1A1-3B,IAI3B,M17S2,MIG19
FUSION GENES
Show Gene Fusions

Other Information

Locus ID:

NCBI: 4077
MIM: 166945
HGNC: 6746
Ensembl: ENSG00000188554

Variants:

dbSNP: 4077
ClinVar: 4077
TCGA: ENSG00000188554
COSMIC: NBR1

RNA/Proteins

Gene IDTranscript IDUniprot
ENSG00000188554ENST00000341165Q14596
ENSG00000188554ENST00000341165A0A024R1V3
ENSG00000188554ENST00000542611B7Z5R6
ENSG00000188554ENST00000586650A0A0C4DGP6
ENSG00000188554ENST00000589872Q14596
ENSG00000188554ENST00000590996Q14596
ENSG00000188554ENST00000590996A0A024R1V3

Expression (GTEx)

0
50
100
150
200
Adipose - Subcutaneous
Adipose - Visceral
Adrenal Gland
Artery - Aorta
Artery - Tibial
Bladder
Brain - Amygdala
Brain - Anterior cingulate cortex
Brain - Caudate
Brain - Cerebellar Hemisphere
Brain - Cerebellum
Brain - Cortex
Brain - Frontal Cortex
Brain - Hippocampus
Brain - Hypothalamus
Brain - Nucleus accumbens
Brain - Putamen
Brain - Spinal cord
Brain - Substantia nigra
Breast - Mammary Tissue
Cells - Cultured fibroblasts
Cells - EBV - transformed lymphocytes
Cervix - Ectocervix
Cervix - Endocervix
Colon - Sigmoid
Colon - Transverse
Esophagus - Gastroesophageal Junction
Esophagus - Mucosa
Esophagus - Muscularis
Fallopian Tube
Heart - Atrial Appendage
Heart - Left Ventricle
Kidney - Cortex
Kidney - Medulla
Liver
Lung
Minor Salivary Gland
Muscle - Skeletal
Nerve - Tibial
Ovary
Pancreas
Pituitary
Prostate
Skin - Not Sun Exposed
Skin - Sun Exposed
Small Intestine - Terminal Ileum
Spleen
Stomach
Testis
Thyroid
Uterus
Vagina
Whole Blood

Pathways

PathwaySourceExternal ID
Mitophagy - animalKEGGko04137
Mitophagy - animalKEGGhsa04137

Protein levels (Protein atlas)

Not detected
Low
Medium
High
cerebral cortex
cerebellum
hippocampus
caudate
thyroid gland
parathyroid gland
adrenal gland
nasopharynx
bronchus
lung
oral mucosa
salivary gland
esophagus
stomach 1
stomach 2
duodenum
small intestine
colon
rectum
liver
gallbladder
pancreas
kidney
urinary bladder
testis
epididymis
seminal vesicle
prostate
vagina
ovary
fallopian tube
endometrium 1
endometrium 2
cervix, uterine
placenta
breast
heart muscle
smooth muscle
skeletal muscle
soft tissue 1
soft tissue 2
adipose tissue
skin 1
skin 2
appendix
spleen
lymph node
tonsil
bone marrow

References

Pubmed IDYearTitleCitations
232390262013NBR1 acts as an autophagy receptor for peroxisomes.100
216066872011Plant NBR1 is a selective autophagy substrate and a functional hybrid of the mammalian autophagic adapters NBR1 and p62/SQSTM1.98
193988922009NBR1 cooperates with p62 in selective autophagy of ubiquitinated targets.63
203796142010Personalized smoking cessation: interactions between nicotine dose, dependence and quit-success genotype score.62
216208602011Characterization of the interaction of GABARAPL-1 with the LIR motif of NBR1.39
269035392016NBR1 enables autophagy-dependent focal adhesion turnover.33
194278662009Interactions with LC3 and polyubiquitin chains link nbr1 to autophagic protein turnover.30
198226722009Spred2 interaction with the late endosomal protein NBR1 down-regulates fibroblast growth factor receptor signaling.22
246925392014Solution structure of the ubiquitin-associated (UBA) domain of human autophagy receptor NBR1 and its interaction with ubiquitin and polyubiquitin.19
224844402012Autophagic adapter protein NBR1 is localized in Lewy bodies and glial cytoplasmic inclusions and is involved in aggregate formation in α-synucleinopathy.17

Citation

Dessen P

NBR1 (NBR1 autophagy cargo receptor)

Atlas Genet Cytogenet Oncol Haematol. 2003-02-01

Online version: http://atlasgeneticsoncology.org/gene/41224/nbr1