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NBR2 (neighbor of BRCA1 gene 2 (non-protein coding))

Identity

Alias_namesneighbor of BRCA1 gene 2
Alias_symbol (synonym)NCRNA00192
Other alias
HGNC (Hugo) NBR2
LocusID (NCBI) 10230
Atlas_Id 41502
Location 17q21  [Link to chromosome band 17q21]

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)NBR2   20691
Cards
Entrez_Gene (NCBI)NBR2  10230  neighbor of BRCA1 gene 2 (non-protein coding)
AliasesNCRNA00192
GeneCards (Weizmann)NBR2
Ensembl hg19 (Hinxton)ENSG00000198496 [Gene_View]  - [Contig_View]  NBR2 [Vega]
Ensembl hg38 (Hinxton)ENSG00000198496 [Gene_View]  - [Contig_View]  NBR2 [Vega]
ICGC DataPortalENSG00000198496
TCGA cBioPortalNBR2
AceView (NCBI)NBR2
Genatlas (Paris)NBR2
WikiGenes10230
SOURCE (Princeton)NBR2
Genetics Home Reference (NIH)NBR2
Genomic and cartography
GoldenPath hg19 (UCSC)NBR2  -  
GoldenPath hg38 (UCSC)NBR2  -  
EnsemblNBR2 - [CytoView hg19]  NBR2 - [CytoView hg38]
Mapping of homologs : NCBINBR2 [Mapview hg19]  NBR2 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AL598622 AY597810 BC022065 BC034248 BC107773
RefSeq transcript (Entrez)NM_005821
RefSeq genomic (Entrez)NC_000017 NC_018928 NG_005905 NT_010783 NW_004929407
Consensus coding sequences : CCDS (NCBI)NBR2
Cluster EST : UnigeneHs.559259 [ NCBI ]
CGAP (NCI)Hs.559259
Alternative Splicing GalleryENSG00000198496
Gene ExpressionNBR2 [ NCBI-GEO ]   NBR2 [ EBI - ARRAY_EXPRESS ]   NBR2 [ SEEK ]   NBR2 [ MEM ]
Gene Expression Viewer (FireBrowse)NBR2 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)10230
GTEX Portal (Tissue expression)NBR2
Protein : pattern, domain, 3D structure
UniProt/SwissProtO15453   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtO15453  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProO15453
Splice isoforms : SwissVarO15453
PhosPhoSitePlusO15453
Domains : Interpro (EBI)ARL17_C   
Domain families : Pfam (Sanger)ARL17 (PF15840)   
Domain families : Pfam (NCBI)pfam15840   
Conserved Domain (NCBI)NBR2
DMDM Disease mutations10230
Blocks (Seattle)NBR2
SuperfamilyO15453
Human Protein AtlasENSG00000198496
Peptide AtlasO15453
HPRD10115
IPIIPI00006704   
Protein Interaction databases
DIP (DOE-UCLA)O15453
IntAct (EBI)O15453
FunCoupENSG00000198496
BioGRIDNBR2
STRING (EMBL)NBR2
ZODIACNBR2
Ontologies - Pathways
QuickGOO15453
Ontology : AmiGO
Ontology : EGO-EBI
NDEx NetworkNBR2
Atlas of Cancer Signalling NetworkNBR2
Wikipedia pathwaysNBR2
Orthology - Evolution
OrthoDB10230
GeneTree (enSembl)ENSG00000198496
Phylogenetic Trees/Animal Genes : TreeFamNBR2
HOVERGENO15453
HOGENOMO15453
Homologs : HomoloGeneNBR2
Homology/Alignments : Family Browser (UCSC)NBR2
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerNBR2 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)NBR2
dbVarNBR2
ClinVarNBR2
1000_GenomesNBR2 
Exome Variant ServerNBR2
ExAC (Exome Aggregation Consortium)NBR2 (select the gene name)
Genetic variants : HAPMAP10230
Genomic Variants (DGV)NBR2 [DGVbeta]
DECIPHER (Syndromes)-  ENSG00000198496
CONAN: Copy Number AnalysisNBR2 
Mutations
ICGC Data PortalNBR2 
TCGA Data PortalNBR2 
Broad Tumor PortalNBR2
OASIS PortalNBR2 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICNBR2  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDNBR2
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch NBR2
DgiDB (Drug Gene Interaction Database)NBR2
DoCM (Curated mutations)NBR2 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)NBR2 (select a term)
intoGenNBR2
Cancer3DNBR2(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenNBR2
Genetic Testing Registry NBR2
NextProtO15453 [Medical]
TSGene10230
GENETestsNBR2
Huge Navigator NBR2 [HugePedia]
snp3D : Map Gene to Disease10230
BioCentury BCIQNBR2
ClinGenNBR2
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD10230
Chemical/Pharm GKB GenePA134896632
Clinical trialNBR2
Miscellaneous
canSAR (ICR)NBR2 (select the gene name)
Probes
Litterature
PubMed14 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineNBR2
EVEXNBR2
GoPubMedNBR2
iHOPNBR2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 13:18:17 CET 2017

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