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NCAPG (non-SMC condensin I complex, subunit G)

Identity

Alias_namesnon-SMC condensin I complex, subunit G
Alias_symbol (synonym)FLJ12450
hCAP-G
CAP-G
YCG1
Other aliasCAPG
CHCG
NY-MEL-3
HGNC (Hugo) NCAPG
LocusID (NCBI) 64151
Atlas_Id 70728
Location 4p15.31  [Link to chromosome band 4p15]
Location_base_pair Starts at 17812436 and ends at 17846487 bp from pter ( according to hg19-Feb_2009)
Fusion genes
(updated 2016)
NCAPG (4p15.31) / ENSA (1q21.3)NCAPG (4p15.31) / NCAPG (4p15.31)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)NCAPG   24304
Cards
Entrez_Gene (NCBI)NCAPG  64151  non-SMC condensin I complex, subunit G
AliasesCAPG; CHCG; NY-MEL-3; YCG1
GeneCards (Weizmann)NCAPG
Ensembl hg19 (Hinxton)ENSG00000109805 [Gene_View]  chr4:17812436-17846487 [Contig_View]  NCAPG [Vega]
Ensembl hg38 (Hinxton)ENSG00000109805 [Gene_View]  chr4:17812436-17846487 [Contig_View]  NCAPG [Vega]
ICGC DataPortalENSG00000109805
TCGA cBioPortalNCAPG
AceView (NCBI)NCAPG
Genatlas (Paris)NCAPG
WikiGenes64151
SOURCE (Princeton)NCAPG
Genetics Home Reference (NIH)NCAPG
Genomic and cartography
GoldenPath hg19 (UCSC)NCAPG  -     chr4:17812436-17846487 +  4p15.31   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)NCAPG  -     4p15.31   [Description]    (hg38-Dec_2013)
EnsemblNCAPG - 4p15.31 [CytoView hg19]  NCAPG - 4p15.31 [CytoView hg38]
Mapping of homologs : NCBINCAPG [Mapview hg19]  NCAPG [Mapview hg38]
OMIM606280   
Gene and transcription
Genbank (Entrez)AB013299 AF235023 AF331796 AK022512 AK023147
RefSeq transcript (Entrez)NM_022346
RefSeq genomic (Entrez)NC_000004 NC_018915 NT_006316 NW_004929315
Consensus coding sequences : CCDS (NCBI)NCAPG
Cluster EST : UnigeneHs.567567 [ NCBI ]
CGAP (NCI)Hs.567567
Alternative Splicing GalleryENSG00000109805
Gene ExpressionNCAPG [ NCBI-GEO ]   NCAPG [ EBI - ARRAY_EXPRESS ]   NCAPG [ SEEK ]   NCAPG [ MEM ]
Gene Expression Viewer (FireBrowse)NCAPG [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)64151
GTEX Portal (Tissue expression)NCAPG
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9BPX3   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9BPX3  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9BPX3
Splice isoforms : SwissVarQ9BPX3
PhosPhoSitePlusQ9BPX3
Domains : Interpro (EBI)ARM-like    ARM-type_fold    CND3    Cnd3_C   
Domain families : Pfam (Sanger)Cnd3 (PF12719)   
Domain families : Pfam (NCBI)pfam12719   
Conserved Domain (NCBI)NCAPG
DMDM Disease mutations64151
Blocks (Seattle)NCAPG
SuperfamilyQ9BPX3
Human Protein AtlasENSG00000109805
Peptide AtlasQ9BPX3
HPRD12097
IPIIPI00106495   IPI00964249   IPI00965628   
Protein Interaction databases
DIP (DOE-UCLA)Q9BPX3
IntAct (EBI)Q9BPX3
FunCoupENSG00000109805
BioGRIDNCAPG
STRING (EMBL)NCAPG
ZODIACNCAPG
Ontologies - Pathways
QuickGOQ9BPX3
Ontology : AmiGOmitotic cell cycle  condensin complex  protein binding  nucleus  cytoplasm  centrosome  cytosol  mitotic chromosome condensation  mitotic chromosome condensation  actin cytoskeleton  membrane  cell division  
Ontology : EGO-EBImitotic cell cycle  condensin complex  protein binding  nucleus  cytoplasm  centrosome  cytosol  mitotic chromosome condensation  mitotic chromosome condensation  actin cytoskeleton  membrane  cell division  
NDEx NetworkNCAPG
Atlas of Cancer Signalling NetworkNCAPG
Wikipedia pathwaysNCAPG
Orthology - Evolution
OrthoDB64151
GeneTree (enSembl)ENSG00000109805
Phylogenetic Trees/Animal Genes : TreeFamNCAPG
HOVERGENQ9BPX3
HOGENOMQ9BPX3
Homologs : HomoloGeneNCAPG
Homology/Alignments : Family Browser (UCSC)NCAPG
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerNCAPG [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)NCAPG
dbVarNCAPG
ClinVarNCAPG
1000_GenomesNCAPG 
Exome Variant ServerNCAPG
ExAC (Exome Aggregation Consortium)NCAPG (select the gene name)
Genetic variants : HAPMAP64151
Genomic Variants (DGV)NCAPG [DGVbeta]
DECIPHER (Syndromes)4:17812436-17846487  ENSG00000109805
CONAN: Copy Number AnalysisNCAPG 
Mutations
ICGC Data PortalNCAPG 
TCGA Data PortalNCAPG 
Broad Tumor PortalNCAPG
OASIS PortalNCAPG [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICNCAPG  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDNCAPG
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch NCAPG
DgiDB (Drug Gene Interaction Database)NCAPG
DoCM (Curated mutations)NCAPG (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)NCAPG (select a term)
intoGenNCAPG
Cancer3DNCAPG(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM606280   
Orphanet
MedgenNCAPG
Genetic Testing Registry NCAPG
NextProtQ9BPX3 [Medical]
TSGene64151
GENETestsNCAPG
Huge Navigator NCAPG [HugePedia]
snp3D : Map Gene to Disease64151
BioCentury BCIQNCAPG
ClinGenNCAPG
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD64151
Chemical/Pharm GKB GenePA162397165
Clinical trialNCAPG
Miscellaneous
canSAR (ICR)NCAPG (select the gene name)
Probes
Litterature
PubMed38 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineNCAPG
EVEXNCAPG
GoPubMedNCAPG
iHOPNCAPG
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 12:34:35 CET 2017

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