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NCAPG2 (non-SMC condensin II complex subunit G2)

Identity

Alias_namesLUZP5
leucine zipper protein 5
non-SMC condensin II complex, subunit G2
Alias_symbol (synonym)FLJ20311
MTB
CAP-G2
hCAP-G2
Other aliasCAPG2
HGNC (Hugo) NCAPG2
LocusID (NCBI) 54892
Atlas_Id 50578
Location 7q36.3  [Link to chromosome band 7q36]
Location_base_pair Starts at 158631169 and ends at 158704831 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
NCAPG2 (7q36.3) / ESYT2 (7q36.3)NCAPG2 (7q36.3) / IQCJ-SCHIP1 (3q25.32)NCAPG2 (7q36.3) / LYAR (4p16.3)
NCAPG2 7q36.3 / IQCJ-SCHIP1 3q25.32

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)NCAPG2   21904
Cards
Entrez_Gene (NCBI)NCAPG2  54892  non-SMC condensin II complex subunit G2
AliasesCAP-G2; CAPG2; LUZP5; MTB; 
hCAP-G2
GeneCards (Weizmann)NCAPG2
Ensembl hg19 (Hinxton)ENSG00000146918 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000146918 [Gene_View]  chr7:158631169-158704831 [Contig_View]  NCAPG2 [Vega]
ICGC DataPortalENSG00000146918
TCGA cBioPortalNCAPG2
AceView (NCBI)NCAPG2
Genatlas (Paris)NCAPG2
WikiGenes54892
SOURCE (Princeton)NCAPG2
Genetics Home Reference (NIH)NCAPG2
Genomic and cartography
GoldenPath hg38 (UCSC)NCAPG2  -     chr7:158631169-158704831 -  7q36.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)NCAPG2  -     7q36.3   [Description]    (hg19-Feb_2009)
EnsemblNCAPG2 - 7q36.3 [CytoView hg19]  NCAPG2 - 7q36.3 [CytoView hg38]
Mapping of homologs : NCBINCAPG2 [Mapview hg19]  NCAPG2 [Mapview hg38]
OMIM608532   
Gene and transcription
Genbank (Entrez)AK000318 AK022744 AK023347 AK092008 AK295057
RefSeq transcript (Entrez)NM_001281932 NM_001281933 NM_017760
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)NCAPG2
Cluster EST : UnigeneHs.18616 [ NCBI ]
CGAP (NCI)Hs.18616
Alternative Splicing GalleryENSG00000146918
Gene ExpressionNCAPG2 [ NCBI-GEO ]   NCAPG2 [ EBI - ARRAY_EXPRESS ]   NCAPG2 [ SEEK ]   NCAPG2 [ MEM ]
Gene Expression Viewer (FireBrowse)NCAPG2 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)54892
GTEX Portal (Tissue expression)NCAPG2
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ86XI2   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ86XI2  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ86XI2
Splice isoforms : SwissVarQ86XI2
PhosPhoSitePlusQ86XI2
Domains : Interpro (EBI)ARM-like    ARM-type_fold    Condensin2_G2   
Domain families : Pfam (Sanger)Condensin2nSMC (PF12422)   
Domain families : Pfam (NCBI)pfam12422   
Conserved Domain (NCBI)NCAPG2
DMDM Disease mutations54892
Blocks (Seattle)NCAPG2
SuperfamilyQ86XI2
Human Protein AtlasENSG00000146918
Peptide AtlasQ86XI2
HPRD10539
IPIIPI00797030   IPI00396058   IPI00909559   IPI00871611   IPI01013518   IPI00916797   
Protein Interaction databases
DIP (DOE-UCLA)Q86XI2
IntAct (EBI)Q86XI2
FunCoupENSG00000146918
BioGRIDNCAPG2
STRING (EMBL)NCAPG2
ZODIACNCAPG2
Ontologies - Pathways
QuickGOQ86XI2
Ontology : AmiGOcondensin complex  inner cell mass cell proliferation  nucleoplasm  cell cycle  membrane  nuclear speck  chromosome condensation  methylated histone binding  cell division  
Ontology : EGO-EBIcondensin complex  inner cell mass cell proliferation  nucleoplasm  cell cycle  membrane  nuclear speck  chromosome condensation  methylated histone binding  cell division  
NDEx NetworkNCAPG2
Atlas of Cancer Signalling NetworkNCAPG2
Wikipedia pathwaysNCAPG2
Orthology - Evolution
OrthoDB54892
GeneTree (enSembl)ENSG00000146918
Phylogenetic Trees/Animal Genes : TreeFamNCAPG2
HOVERGENQ86XI2
HOGENOMQ86XI2
Homologs : HomoloGeneNCAPG2
Homology/Alignments : Family Browser (UCSC)NCAPG2
Gene fusions - Rearrangements
Fusion : MitelmanNCAPG2/IQCJ-SCHIP1 [7q36.3/3q25.32]  
Fusion: TCGANCAPG2 7q36.3 IQCJ-SCHIP1 3q25.32 LUSC
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerNCAPG2 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)NCAPG2
dbVarNCAPG2
ClinVarNCAPG2
1000_GenomesNCAPG2 
Exome Variant ServerNCAPG2
ExAC (Exome Aggregation Consortium)NCAPG2 (select the gene name)
Genetic variants : HAPMAP54892
Genomic Variants (DGV)NCAPG2 [DGVbeta]
DECIPHERNCAPG2 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisNCAPG2 
Mutations
ICGC Data PortalNCAPG2 
TCGA Data PortalNCAPG2 
Broad Tumor PortalNCAPG2
OASIS PortalNCAPG2 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICNCAPG2  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDNCAPG2
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch NCAPG2
DgiDB (Drug Gene Interaction Database)NCAPG2
DoCM (Curated mutations)NCAPG2 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)NCAPG2 (select a term)
intoGenNCAPG2
Cancer3DNCAPG2(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM608532   
Orphanet
MedgenNCAPG2
Genetic Testing Registry NCAPG2
NextProtQ86XI2 [Medical]
TSGene54892
GENETestsNCAPG2
Target ValidationNCAPG2
Huge Navigator NCAPG2 [HugePedia]
snp3D : Map Gene to Disease54892
BioCentury BCIQNCAPG2
ClinGenNCAPG2
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD54892
Chemical/Pharm GKB GenePA162397212
Clinical trialNCAPG2
Miscellaneous
canSAR (ICR)NCAPG2 (select the gene name)
Probes
Litterature
PubMed21 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineNCAPG2
EVEXNCAPG2
GoPubMedNCAPG2
iHOPNCAPG2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 14:01:16 CEST 2017

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