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NCBP2-AS2 (NCBP2 antisense RNA 2 (head to head))

Identity

Other alias-
HGNC (Hugo) NCBP2-AS2
LocusID (NCBI) 152217
Atlas_Id 70732
Location 3q29  [Link to chromosome band 3q29]
Location_base_pair Starts at 196942623 and ends at 196944013 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

|TD"WIDTH=15%>snp3D : Map Gene to Disease
Nomenclature
HGNC (Hugo)NCBP2-AS2   25121
Cards
Entrez_Gene (NCBI)NCBP2-AS2  152217  NCBP2 antisense RNA 2 (head to head)
Aliases
GeneCards (Weizmann)NCBP2-AS2
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr3:196942623-196944013 [Contig_View]  NCBP2-AS2 [Vega]
TCGA cBioPortalNCBP2-AS2
AceView (NCBI)NCBP2-AS2
Genatlas (Paris)NCBP2-AS2
WikiGenes152217
SOURCE (Princeton)NCBP2-AS2
Genetics Home Reference (NIH)NCBP2-AS2
Genomic and cartography
GoldenPath hg38 (UCSC)NCBP2-AS2  -     chr3:196942623-196944013 +  3q29   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)NCBP2-AS2  -     3q29   [Description]    (hg19-Feb_2009)
EnsemblNCBP2-AS2 - 3q29 [CytoView hg19]  NCBP2-AS2 - 3q29 [CytoView hg38]
Mapping of homologs : NCBINCBP2-AS2 [Mapview hg19]  NCBP2-AS2 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK123020 AL832915 BC000257 BC007882 BC062368
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)NCBP2-AS2
Cluster EST : UnigeneHs.118820 [ NCBI ]
CGAP (NCI)Hs.118820
Gene ExpressionNCBP2-AS2 [ NCBI-GEO ]   NCBP2-AS2 [ EBI - ARRAY_EXPRESS ]   NCBP2-AS2 [ SEEK ]   NCBP2-AS2 [ MEM ]
Gene Expression Viewer (FireBrowse)NCBP2-AS2 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)152217
GTEX Portal (Tissue expression)NCBP2-AS2
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ69YL0   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ69YL0  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ69YL0
Splice isoforms : SwissVarQ69YL0
PhosPhoSitePlusQ69YL0
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)NCBP2-AS2
DMDM Disease mutations152217
Blocks (Seattle)NCBP2-AS2
SuperfamilyQ69YL0
Peptide AtlasQ69YL0
HPRD14094
IPIIPI00032343   
Protein Interaction databases
DIP (DOE-UCLA)Q69YL0
IntAct (EBI)Q69YL0
BioGRIDNCBP2-AS2
STRING (EMBL)NCBP2-AS2
ZODIACNCBP2-AS2
Ontologies - Pathways
QuickGOQ69YL0
Ontology : AmiGO
Ontology : EGO-EBI
NDEx NetworkNCBP2-AS2
Atlas of Cancer Signalling NetworkNCBP2-AS2
Wikipedia pathwaysNCBP2-AS2
Orthology - Evolution
OrthoDB152217
Phylogenetic Trees/Animal Genes : TreeFamNCBP2-AS2
HOVERGENQ69YL0
HOGENOMQ69YL0
Homologs : HomoloGeneNCBP2-AS2
Homology/Alignments : Family Browser (UCSC)NCBP2-AS2
Gene fusions - Rearrangements
Tumor Fusion PortalNCBP2-AS2
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerNCBP2-AS2 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)NCBP2-AS2
dbVarNCBP2-AS2
ClinVarNCBP2-AS2
1000_GenomesNCBP2-AS2 
Exome Variant ServerNCBP2-AS2
ExAC (Exome Aggregation Consortium)
Genetic variants : HAPMAP152217
Genomic Variants (DGV)NCBP2-AS2 [DGVbeta]
DECIPHERNCBP2-AS2 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisNCBP2-AS2 
Mutations
ICGC Data PortalNCBP2-AS2 
TCGA Data PortalNCBP2-AS2 
Broad Tumor PortalNCBP2-AS2
OASIS PortalNCBP2-AS2 [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDNCBP2-AS2
BioMutasearch NCBP2-AS2
DgiDB (Drug Gene Interaction Database)NCBP2-AS2
DoCM (Curated mutations)NCBP2-AS2 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)NCBP2-AS2 (select a term)
intoGenNCBP2-AS2
Cancer3DNCBP2-AS2(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
DisGeNETNCBP2-AS2
MedgenNCBP2-AS2
Genetic Testing Registry NCBP2-AS2
NextProtQ69YL0 [Medical]
TSGene152217
GENETestsNCBP2-AS2
Target ValidationNCBP2-AS2
Huge Navigator NCBP2-AS2 [HugePedia]
152217
BioCentury BCIQNCBP2-AS2
ClinGenNCBP2-AS2
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD152217
Clinical trialNCBP2-AS2
Miscellaneous
canSAR (ICR)NCBP2-AS2 (select the gene name)
Probes
Litterature
PubMed4 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineNCBP2-AS2
EVEXNCBP2-AS2
GoPubMedNCBP2-AS2
iHOPNCBP2-AS2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Nov 21 13:08:34 CET 2017

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