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NCBP3 (nuclear cap binding subunit 3)

Identity

Alias_namesC17orf85
chromosome 17 open reading frame 85
Alias_symbol (synonym)HSA277841
ELG
Other alias
HGNC (Hugo) NCBP3
LocusID (NCBI) 55421
Atlas_Id 77938
Location 17p13.2  [Link to chromosome band 17p13]
Location_base_pair Starts at 3710045 and ends at 3749545 bp from pter ( according to hg19-Feb_2009)
Fusion genes
(updated 2016)
EGLN3 (14q13.1) / NCBP3 (17p13.2)NCBP3 (17p13.2) / CAMKK1 (17p13.2)NCBP3 (17p13.2) / LRPAP1 (4p16.3)
NCBP3 (17p13.2) / NCBP3 (17p13.2)NCBP3 (17p13.2) / PPM1E (17q22)TAX1BP3 (17p13.2) / NCBP3 (17p13.2)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)NCBP3   24612
Cards
Entrez_Gene (NCBI)NCBP3  55421  nuclear cap binding subunit 3
AliasesC17orf85; ELG; HSA277841
GeneCards (Weizmann)NCBP3
Ensembl hg19 (Hinxton) [Gene_View]  chr17:3710045-3749545 [Contig_View]  NCBP3 [Vega]
Ensembl hg38 (Hinxton) [Gene_View]  chr17:3710045-3749545 [Contig_View]  NCBP3 [Vega]
TCGA cBioPortalNCBP3
AceView (NCBI)NCBP3
Genatlas (Paris)NCBP3
WikiGenes55421
SOURCE (Princeton)NCBP3
Genetics Home Reference (NIH)NCBP3
Genomic and cartography
GoldenPath hg19 (UCSC)NCBP3  -     chr17:3710045-3749545 -  17p13.2   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)NCBP3  -     17p13.2   [Description]    (hg38-Dec_2013)
EnsemblNCBP3 - 17p13.2 [CytoView hg19]  NCBP3 - 17p13.2 [CytoView hg38]
Mapping of homologs : NCBINCBP3 [Mapview hg19]  NCBP3 [Mapview hg38]
OMIM616624   
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)NM_001114118 NM_018553
RefSeq genomic (Entrez)NC_000017 NC_018928 NT_010718 NW_004929405
Consensus coding sequences : CCDS (NCBI)NCBP3
Cluster EST : UnigeneHs.120963 [ NCBI ]
CGAP (NCI)Hs.120963
Gene ExpressionNCBP3 [ NCBI-GEO ]   NCBP3 [ EBI - ARRAY_EXPRESS ]   NCBP3 [ SEEK ]   NCBP3 [ MEM ]
Gene Expression Viewer (FireBrowse)NCBP3 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)55421
GTEX Portal (Tissue expression)NCBP3
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)NCBP3
DMDM Disease mutations55421
Blocks (Seattle)NCBP3
HPRD17116
IPIIPI00782974   IPI00032056   
Protein Interaction databases
BioGRIDNCBP3
STRING (EMBL)NCBP3
ZODIACNCBP3
Ontologies - Pathways
Huge Navigator NCBP3 [HugePedia]
snp3D : Map Gene to Disease55421
BioCentury BCIQNCBP3
ClinGenNCBP3
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD55421
Chemical/Pharm GKB GenePA145149545
Clinical trialNCBP3
Miscellaneous
canSAR (ICR)NCBP3 (select the gene name)
Probes
Litterature
PubMed20 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineNCBP3
EVEXNCBP3
GoPubMedNCBP3
iHOPNCBP3
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 12:34:36 CET 2017

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