Atlas of Genetics and Cytogenetics in Oncology and Haematology


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NCR3 (natural cytotoxicity triggering receptor 3)

Identity

Alias (NCBI)1C7
CD337
LY117
MALS
NKp30
HGNC (Hugo) NCR3
HGNC Alias symb1C7
NKp30
CD337
HGNC Previous nameLY117
HGNC Previous namelymphocyte antigen 117
LocusID (NCBI) 259197
Atlas_Id 45913
Location 6p21.33  [Link to chromosome band 6p21]
Location_base_pair Starts at 31588895 and ends at 31593006 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
PRRC2A (6p21.33) / NCR3 (6p21.33)PTK2 (8q24.3) / NCR3 (6p21.33)PRRC2A 6p21.33 / NCR3 6p21.33
PTK2 8q24.3 / NCR3 6p21.33

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

Nomenclature
HGNC (Hugo)NCR3   19077
Cards
Entrez_Gene (NCBI)NCR3    natural cytotoxicity triggering receptor 3
Aliases1C7; CD337; LY117; MALS; 
NKp30
GeneCards (Weizmann)NCR3
Ensembl hg19 (Hinxton)ENSG00000204475 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000204475 [Gene_View]  ENSG00000204475 [Sequence]  chr6:31588895-31593006 [Contig_View]  NCR3 [Vega]
ICGC DataPortalENSG00000204475
TCGA cBioPortalNCR3
AceView (NCBI)NCR3
Genatlas (Paris)NCR3
SOURCE (Princeton)NCR3
Genetics Home Reference (NIH)NCR3
Genomic and cartography
GoldenPath hg38 (UCSC)NCR3  -     chr6:31588895-31593006 -  6p21.33   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)NCR3  -     6p21.33   [Description]    (hg19-Feb_2009)
GoldenPathNCR3 - 6p21.33 [CytoView hg19]  NCR3 - 6p21.33 [CytoView hg38]
ImmunoBaseENSG00000204475
genome Data Viewer NCBINCR3 [Mapview hg19]  
OMIM609148   611550   
Gene and transcription
Genbank (Entrez)AB055881 AF031136 AF031137 AF031138 AJ223153
RefSeq transcript (Entrez)NM_001145466 NM_001145467 NM_147130
RefSeq genomic (Entrez)NC_000006 NG_021176 NT_113891 NT_167244 NT_167245 NT_167246 NT_167247 NT_167248 NT_167249
Consensus coding sequences : CCDS (NCBI)NCR3
Alternative Splicing GalleryENSG00000204475
Gene ExpressionNCR3 [ NCBI-GEO ]   NCR3 [ EBI - ARRAY_EXPRESS ]   NCR3 [ SEEK ]   NCR3 [ MEM ]
Gene Expression Viewer (FireBrowse)NCR3 [ Firebrowse - Broad ]
GenevisibleExpression of NCR3 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)259197
GTEX Portal (Tissue expression)NCR3
Human Protein AtlasENSG00000204475-NCR3 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)NCR3
Blocks (Seattle)NCR3
Human Protein Atlas [tissue]ENSG00000204475-NCR3 [tissue]
HPRD11384
IPIIPI00384964   IPI00411498   IPI00011558   IPI00013125   IPI00032121   IPI00383788   IPI00985298   
Protein Interaction databases
BioGRIDNCR3
STRING (EMBL)NCR3
ZODIACNCR3
Ontologies - Pathways
Litterature
PubMed92 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXNCR3
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

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indexed on : Thu Mar 25 19:36:00 CET 2021

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