Atlas of Genetics and Cytogenetics in Oncology and Haematology


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NCRNA00250 (non-protein coding RNA 250)

Identity

Other aliasC8orf24
HGNC (Hugo) -
LocusID (NCBI) 552853
Atlas_Id 70743
Location 8q24.22  [Link to chromosome band 8q24]
Location_base_pair Starts at 134838069 and ends at 134842637 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)-   -
Cards
Entrez_Gene (NCBI)NCRNA00250  552853  non-protein coding RNA 250
AliasesC8orf24
GeneCards (Weizmann)NCRNA00250
Ensembl hg19 (Hinxton)ENSG00000253433 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000253433 [Gene_View]  chr8:134838069-134842637 [Contig_View]  NCRNA00250 [Vega]
ICGC DataPortalENSG00000253433
TCGA cBioPortalNCRNA00250
AceView (NCBI)NCRNA00250
Genatlas (Paris)NCRNA00250
WikiGenes552853
SOURCE (Princeton)NCRNA00250
Genetics Home Reference (NIH)NCRNA00250
Genomic and cartography
GoldenPath hg38 (UCSC)NCRNA00250  -     chr8:134838069-134842637 +  8q24.22   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)NCRNA00250  -     8q24.22   [Description]    (hg19-Feb_2009)
EnsemblNCRNA00250 - 8q24.22 [CytoView hg19]  NCRNA00250 - 8q24.22 [CytoView hg38]
Mapping of homologs : NCBINCRNA00250 [Mapview hg19]  NCRNA00250 [Mapview hg38]
Gene and transcription
Genbank (Entrez)DA569006 DB355589
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)NCRNA00250
Cluster EST : UnigeneHs.575612 [ NCBI ]
CGAP (NCI)Hs.575612
Alternative Splicing GalleryENSG00000253433
Gene ExpressionNCRNA00250 [ NCBI-GEO ]   NCRNA00250 [ EBI - ARRAY_EXPRESS ]   NCRNA00250 [ SEEK ]   NCRNA00250 [ MEM ]
Gene Expression Viewer (FireBrowse)NCRNA00250 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)552853
GTEX Portal (Tissue expression)NCRNA00250
Human Protein AtlasENSG00000253433-NCRNA00250 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)NCRNA00250
DMDM Disease mutations552853
Blocks (Seattle)NCRNA00250
Human Protein Atlas [tissue]ENSG00000253433-NCRNA00250 [tissue]
Protein Interaction databases
FunCoupENSG00000253433
BioGRIDNCRNA00250
STRING (EMBL)NCRNA00250
ZODIACNCRNA00250
Ontologies - Pathways
Huge Navigator - [HugePedia]
snp3D : Map Gene to Disease552853
BioCentury BCIQNCRNA00250
ClinGenNCRNA00250
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD552853
Chemical/Pharm GKB GenePA165585760
Clinical trialNCRNA00250
Miscellaneous
canSAR (ICR)NCRNA00250 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineNCRNA00250
EVEXNCRNA00250
GoPubMedNCRNA00250
iHOPNCRNA00250
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Thu Nov 9 12:18:41 CET 2017

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