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ND1 (NADH dehydrogenase, subunit 1 (complex I))

Identity

HGNC (Hugo) MT-ND1
LocusID (NCBI) 4535
Atlas_Id 55917
Location M  [Link to chromosome band ]
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)MT-ND1   7455
Cards
Entrez_Gene (NCBI)ND1  4535  NADH dehydrogenase, subunit 1 (complex I)
AliasesMTND1
GeneCards (Weizmann)ND1
Ensembl hg19 (Hinxton) [Gene_View]  - [Contig_View]  ND1 [Vega]
Ensembl hg38 (Hinxton) [Gene_View]  - [Contig_View]  ND1 [Vega]
TCGA cBioPortalND1
AceView (NCBI)ND1
Genatlas (Paris)ND1
WikiGenes4535
SOURCE (Princeton)ND1
Genetics Home Reference (NIH)ND1
Genomic and cartography
GoldenPath hg19 (UCSC)ND1  -  
GoldenPath hg38 (UCSC)ND1  -  
EnsemblND1 - [CytoView hg19]  ND1 - [CytoView hg38]
Mapping of homologs : NCBIND1 [Mapview hg19]  ND1 [Mapview hg38]
OMIM516000   535000   540000   
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)ND1
Gene ExpressionND1 [ NCBI-GEO ]   ND1 [ EBI - ARRAY_EXPRESS ]   ND1 [ SEEK ]   ND1 [ MEM ]
Gene Expression Viewer (FireBrowse)ND1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)4535
GTEX Portal (Tissue expression)ND1
Protein : pattern, domain, 3D structure
UniProt/SwissProtP03886   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtP03886  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProP03886
Splice isoforms : SwissVarP03886
Catalytic activity : Enzyme1.6.5.3 [ Enzyme-Expasy ]   1.6.5.31.6.5.3 [ IntEnz-EBI ]   1.6.5.3 [ BRENDA ]   1.6.5.3 [ KEGG ]   
PhosPhoSitePlusP03886
Domaine pattern : Prosite (Expaxy)COMPLEX1_ND1_1 (PS00667)    COMPLEX1_ND1_2 (PS00668)   
Domains : Interpro (EBI)NADH_UbQ_OxRdtase_su1/FPO    NADH_UbQ_OxRdtase_su1_CS   
Domain families : Pfam (Sanger)NADHdh (PF00146)   
Domain families : Pfam (NCBI)pfam00146   
Conserved Domain (NCBI)ND1
DMDM Disease mutations4535
Blocks (Seattle)ND1
SuperfamilyP03886
Peptide AtlasP03886
IPIIPI00007961   IPI00980912   
Protein Interaction databases
DIP (DOE-UCLA)P03886
IntAct (EBI)P03886
BioGRIDND1
STRING (EMBL)ND1
ZODIACND1
Ontologies - Pathways
QuickGOP03886
Ontology : AmiGO
Ontology : EGO-EBI
Pathways : KEGGOxidative phosphorylation    Parkinson's disease   
NDEx NetworkND1
Atlas of Cancer Signalling NetworkND1
Wikipedia pathwaysND1
Orthology - Evolution
OrthoDB4535
Phylogenetic Trees/Animal Genes : TreeFamMT-ND1
HOVERGENP03886
HOGENOMP03886
Homologs : HomoloGeneND1
Homology/Alignments : Family Browser (UCSC)ND1
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerND1 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ND1
dbVarND1
ClinVarND1
1000_GenomesND1 
Exome Variant ServerND1
ExAC (Exome Aggregation Consortium)ND1 (select the gene name)
Genetic variants : HAPMAP4535
Genomic Variants (DGV)ND1 [DGVbeta]
DECIPHER (Syndromes)-  
CONAN: Copy Number AnalysisND1 
Mutations
ICGC Data PortalMT-ND1 
TCGA Data PortalMT-ND1 
Broad Tumor PortalMT-ND1
OASIS PortalMT-ND1 [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDMT-ND1
BioMutasearch ND1
DgiDB (Drug Gene Interaction Database)ND1
DoCM (Curated mutations)ND1 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)ND1 (select a term)
intoGenND1
Cancer3DND1(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM516000    535000    540000   
Orphanet
MedgenND1
Genetic Testing Registry ND1
NextProtP03886 [Medical]
TSGene4535
GENETestsND1
Huge Navigator MT-ND1 [HugePedia]
snp3D : Map Gene to Disease4535
BioCentury BCIQND1
ClinGenND1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD4535
Chemical/Pharm GKB GenePA31259
Clinical trialND1
Miscellaneous
canSAR (ICR)ND1 (select the gene name)
Probes
Litterature
PubMed100 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineND1
EVEXND1
GoPubMedND1
iHOPND1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Fri Nov 18 19:45:34 CET 2016

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