Atlas of Genetics and Cytogenetics in Oncology and Haematology


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ND2 (MTND2)

Identity

Other namesMTND2
HGNC (Hugo) MT-ND2
LocusID (NCBI) 4536
Location mitochondria
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

External links

Nomenclature
HGNC (Hugo)MT-ND2   7456
Cards
Entrez_Gene (NCBI)ND2  4536  MTND2
GeneCards (Weizmann)ND2
Ensembl (Hinxton) [Gene_View]  - [Contig_View]  ND2 [Vega]
cBioPortalND2
AceView (NCBI)ND2
Genatlas (Paris)ND2
WikiGenes4536
SOURCE (Princeton)
Genomic and cartography
GoldenPath (UCSC)ND2  -  mitochondria
EnsemblND2 - [CytoView]
Mapping of homologs : NCBIND2 [Mapview]
OMIM516001   535000   
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)ND2
Gene ExpressionND2 [ NCBI-GEO ]     ND2 [ SEEK ]   ND2 [ MEM ]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
DMDM Disease mutations4536
IPIIPI00007979   IPI00656136   
Protein Interaction databases
BioGRIDND2
IntegromeDBND2
STRING (EMBL)ND2
Ontologies - Pathways
Ontology : AmiGO
Ontology : EGO-EBI
Pathways : KEGGOxidative phosphorylation    Parkinson's disease   
Protein Interaction DatabaseND2
Wikipedia pathwaysND2
Gene fusion - rearrangments
Polymorphisms : SNP, mutations, diseases
SNP Single Nucleotide Polymorphism (NCBI)ND2
snp3D : Map Gene to Disease4536
SNP (GeneSNP Utah)ND2
SNP : HGBaseND2
Genetic variants : HAPMAPND2
Exome VariantND2
1000_GenomesND2 
Mutations and Diseases : HGMDMT-ND2
Mutations and Diseases : intOGenMT-ND2
Genomic VariantsND2  ND2 [DGVbeta]
dbVarND2
ClinVarND2
Pred. of missensesPolyPhen-2  SIFT(SG)  SIFT(JCVI)  Align-GVGD  MutAssessor  Mutanalyser  
Pred. splicesGeneSplicer  Human Splicing Finder  MaxEntScan  
Diseases
OMIM516001    535000   
MedgenND2
GENETestsND2
Disease Genetic AssociationMT-ND2
Huge Navigator MT-ND2 [HugePedia]  MT-ND2 [HugeCancerGEM]
General knowledge
Homologs : HomoloGeneND2
Homology/Alignments : Family Browser (UCSC)ND2
Phylogenetic Trees/Animal Genes : TreeFamMT-ND2
Chemical/Protein Interactions : CTD4536
Chemical/Pharm GKB GenePA31260
Clinical trialND2
Other databases
Probes
Litterature
PubMed52 Pubmed reference(s) in Entrez
CoreMineND2
iHOPND2
OncoSearchND2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written09-2002Dessen P, Le Minor S
Updated12-2013Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Aug 26 16:57:19 CEST 2014

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