Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumours   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

ND2 (MTND2)

Identity

HGNC (Hugo) MT-ND2
LocusID (NCBI) 4536
Atlas_Id 55918
Location M  [Link to chromosome band ]
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)MT-ND2   7456
Cards
Entrez_Gene (NCBI)ND2  4536  MTND2
AliasesMTND2
GeneCards (Weizmann)ND2
Ensembl hg19 (Hinxton) [Gene_View]  - [Contig_View]  ND2 [Vega]
Ensembl hg38 (Hinxton) [Gene_View]  - [Contig_View]  ND2 [Vega]
TCGA cBioPortalND2
AceView (NCBI)ND2
Genatlas (Paris)ND2
WikiGenes4536
SOURCE (Princeton)ND2
Genetics Home Reference (NIH)ND2
Genomic and cartography
GoldenPath hg19 (UCSC)ND2  -  
GoldenPath hg38 (UCSC)ND2  -  
EnsemblND2 - [CytoView hg19]  ND2 - [CytoView hg38]
Mapping of homologs : NCBIND2 [Mapview hg19]  ND2 [Mapview hg38]
OMIM516001   535000   
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)ND2
Gene ExpressionND2 [ NCBI-GEO ]   ND2 [ EBI - ARRAY_EXPRESS ]   ND2 [ SEEK ]   ND2 [ MEM ]
Gene Expression Viewer (FireBrowse)ND2 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)4536
GTEX Portal (Tissue expression)ND2
Protein : pattern, domain, 3D structure
UniProt/SwissProtP03891   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtP03891  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProP03891
Splice isoforms : SwissVarP03891
Catalytic activity : Enzyme1.6.5.3 [ Enzyme-Expasy ]   1.6.5.31.6.5.3 [ IntEnz-EBI ]   1.6.5.3 [ BRENDA ]   1.6.5.3 [ KEGG ]   
PhosPhoSitePlusP03891
Domains : Interpro (EBI)NADH_DH_su2_C    NADH_UbQ_OxRdtase_chain2    ND/Mrp_mem   
Domain families : Pfam (Sanger)NADH_dehy_S2_C (PF06444)    Proton_antipo_M (PF00361)   
Domain families : Pfam (NCBI)pfam06444    pfam00361   
Conserved Domain (NCBI)ND2
DMDM Disease mutations4536
Blocks (Seattle)ND2
SuperfamilyP03891
Peptide AtlasP03891
IPIIPI00007979   IPI00656136   
Protein Interaction databases
DIP (DOE-UCLA)P03891
IntAct (EBI)P03891
BioGRIDND2
STRING (EMBL)ND2
ZODIACND2
Ontologies - Pathways
QuickGOP03891
Ontology : AmiGO
Ontology : EGO-EBI
Pathways : KEGGOxidative phosphorylation    Parkinson's disease   
NDEx NetworkND2
Atlas of Cancer Signalling NetworkND2
Wikipedia pathwaysND2
Orthology - Evolution
OrthoDB4536
Phylogenetic Trees/Animal Genes : TreeFamMT-ND2
HOVERGENP03891
HOGENOMP03891
Homologs : HomoloGeneND2
Homology/Alignments : Family Browser (UCSC)ND2
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerND2 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ND2
dbVarND2
ClinVarND2
1000_GenomesND2 
Exome Variant ServerND2
ExAC (Exome Aggregation Consortium)ND2 (select the gene name)
Genetic variants : HAPMAP4536
Genomic Variants (DGV)ND2 [DGVbeta]
DECIPHER (Syndromes)-  
CONAN: Copy Number AnalysisND2 
Mutations
ICGC Data PortalMT-ND2 
TCGA Data PortalMT-ND2 
Broad Tumor PortalMT-ND2
OASIS PortalMT-ND2 [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDMT-ND2
BioMutasearch ND2
DgiDB (Drug Gene Interaction Database)ND2
DoCM (Curated mutations)ND2 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)ND2 (select a term)
intoGenND2
Cancer3DND2(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM516001    535000   
Orphanet
MedgenND2
Genetic Testing Registry ND2
NextProtP03891 [Medical]
TSGene4536
GENETestsND2
Huge Navigator MT-ND2 [HugePedia]
snp3D : Map Gene to Disease4536
BioCentury BCIQND2
ClinGenND2
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD4536
Chemical/Pharm GKB GenePA31260
Clinical trialND2
Miscellaneous
canSAR (ICR)ND2 (select the gene name)
Probes
Litterature
PubMed57 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineND2
EVEXND2
GoPubMedND2
iHOPND2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Fri Nov 18 19:45:34 CET 2016

Home   Genes   Leukemias   Solid Tumours   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.