Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

ND3 (NADH dehydrogenase, subunit 3 (complex I))

Identity

Other aliasMTND3
HGNC (Hugo) MT-ND3
LocusID (NCBI) 4537
Atlas_Id 55789
Location -  [Link to chromosome band ]
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)MT-ND3   7458
Cards
Entrez_Gene (NCBI)ND3  4537  NADH dehydrogenase, subunit 3 (complex I)
AliasesMTND3
GeneCards (Weizmann)ND3
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  - [Contig_View]  ND3 [Vega]
TCGA cBioPortalND3
AceView (NCBI)ND3
Genatlas (Paris)ND3
WikiGenes4537
SOURCE (Princeton)ND3
Genetics Home Reference (NIH)ND3
Genomic and cartography
GoldenPath hg38 (UCSC)ND3  -  
GoldenPath hg19 (UCSC)ND3  -  
EnsemblND3 - [CytoView hg19]  ND3 - [CytoView hg38]
Mapping of homologs : NCBIND3 [Mapview hg19]  ND3 [Mapview hg38]
OMIM516002   
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)ND3
Gene ExpressionND3 [ NCBI-GEO ]   ND3 [ EBI - ARRAY_EXPRESS ]   ND3 [ SEEK ]   ND3 [ MEM ]
Gene Expression Viewer (FireBrowse)ND3 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)4537
GTEX Portal (Tissue expression)ND3
Protein : pattern, domain, 3D structure
UniProt/SwissProtP03897   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtP03897  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProP03897
Splice isoforms : SwissVarP03897
Catalytic activity : Enzyme1.6.5.3 [ Enzyme-Expasy ]   1.6.5.31.6.5.3 [ IntEnz-EBI ]   1.6.5.3 [ BRENDA ]   1.6.5.3 [ KEGG ]   
PhosPhoSitePlusP03897
Domains : Interpro (EBI)NADH_UbQ/plastoQ_OxRdtase_su3   
Domain families : Pfam (Sanger)Oxidored_q4 (PF00507)   
Domain families : Pfam (NCBI)pfam00507   
Conserved Domain (NCBI)ND3
DMDM Disease mutations4537
Blocks (Seattle)ND3
SuperfamilyP03897
Peptide AtlasP03897
IPIIPI00071334   
Protein Interaction databases
DIP (DOE-UCLA)P03897
IntAct (EBI)P03897
BioGRIDND3
STRING (EMBL)ND3
ZODIACND3
Ontologies - Pathways
QuickGOP03897
Ontology : AmiGOprotein binding  mitochondrial inner membrane  mitochondrial respiratory chain complex I  mitochondrial respiratory chain complex I  mitochondrial electron transport, NADH to ubiquinone  mitochondrial electron transport, NADH to ubiquinone  response to oxidative stress  NADH dehydrogenase (ubiquinone) activity  NADH dehydrogenase (ubiquinone) activity  response to light intensity  integral component of membrane  mitochondrial respiratory chain complex I assembly  oxidation-reduction process  cellular response to glucocorticoid stimulus  
Ontology : EGO-EBIprotein binding  mitochondrial inner membrane  mitochondrial respiratory chain complex I  mitochondrial respiratory chain complex I  mitochondrial electron transport, NADH to ubiquinone  mitochondrial electron transport, NADH to ubiquinone  response to oxidative stress  NADH dehydrogenase (ubiquinone) activity  NADH dehydrogenase (ubiquinone) activity  response to light intensity  integral component of membrane  mitochondrial respiratory chain complex I assembly  oxidation-reduction process  cellular response to glucocorticoid stimulus  
NDEx NetworkND3
Atlas of Cancer Signalling NetworkND3
Wikipedia pathwaysND3
Orthology - Evolution
OrthoDB4537
Phylogenetic Trees/Animal Genes : TreeFamMT-ND3
HOVERGENP03897
HOGENOMP03897
Homologs : HomoloGeneND3
Homology/Alignments : Family Browser (UCSC)ND3
Gene fusions - Rearrangements
Fusion : QuiverND3
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerND3 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ND3
dbVarND3
ClinVarND3
1000_GenomesND3 
Exome Variant ServerND3
Genetic variants : HAPMAP4537
Genomic Variants (DGV)ND3 [DGVbeta]
DECIPHERND3 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisND3 
Mutations
ICGC Data PortalMT-ND3 
TCGA Data PortalMT-ND3 
Broad Tumor PortalMT-ND3
OASIS PortalMT-ND3 [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDMT-ND3
BioMutasearch ND3
DgiDB (Drug Gene Interaction Database)ND3
DoCM (Curated mutations)ND3 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)ND3 (select a term)
intoGenND3
Cancer3DND3(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM516002   
Orphanet
DisGeNETND3
MedgenND3
Genetic Testing Registry ND3
NextProtP03897 [Medical]
TSGene4537
GENETestsND3
Target ValidationND3
Huge Navigator MT-ND3 [HugePedia]
snp3D : Map Gene to Disease4537
BioCentury BCIQND3
ClinGenND3
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD4537
Chemical/Pharm GKB GenePA31262
Clinical trialND3
Miscellaneous
canSAR (ICR)ND3 (select the gene name)
Probes
Litterature
PubMed45 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineND3
EVEXND3
GoPubMedND3
iHOPND3
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed Feb 28 13:27:15 CET 2018

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.