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ND5 (NADH dehydrogenase, subunit 5 (complex I))

Identity

Other namesMTND5
HGNC (Hugo) MT-ND5
LocusID (NCBI) 4540
Location mitochondria
Location_base_pair Starts at 12338 and ends at 14538 bp from pter ( according to hg19-Feb_2009)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

External links

Nomenclature
HGNC (Hugo)MT-ND5   7461
Entrez_Gene (NCBI)ND5  4540  NADH dehydrogenase, subunit 5 (complex I)
Cards
GeneCards (Weizmann)ND5
Ensembl (Hinxton) [Gene_View]  chrM:12338-14538 [Contig_View]  ND5 [Vega]
AceView (NCBI)ND5
Genatlas (Paris)ND5
SOURCE (Stanford)
Genomic and cartography
GoldenPath (UCSC)ND5  -  mitochondria   chrM:12338-14538 +  -   [Description]    (hg19-Feb_2009)
EnsemblND5 - - [CytoView]
Mapping of homologs : NCBIND5 [Mapview]
Gene and transcription
Genbank (Entrez)AF339085 AF339086
RefSeq transcript (SRS)
RefSeq transcript (Entrez)
RefSeq genomic (SRS)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)ND5
Gene ExpressionND5 [ NCBI-GEO ]   ND5 [ EBI - ARRAY_EXPRESS ]
Protein : pattern, domain, 3D structure
UniProt/SwissProtP03915 (SRS) P03915 (Uniprot)
NextProtP03915
With graphics : InterProP03915
Splice isoforms : SwissVarP03915(Swissvar)
Domains : Interpro (SRS)NADH_DH_su5_C    NADH_UbQ/plastoQ_OxRdtase    NADH_UbQ_OxRdtase_chain5/L_N    NADHpl_OxRdtase_5   
Domains : Interpro (EBI)NADH_DH_su5_C    NADH_UbQ/plastoQ_OxRdtase    NADH_UbQ_OxRdtase_chain5/L_N    NADHpl_OxRdtase_5   
Related proteins : CluSTrP03915
Domain families : Pfam (SRS)NADH5_C (PF06455)    Oxidored_q1 (PF00361)    Oxidored_q1_N (PF00662)   
Domain families : Pfam (Sanger)NADH5_C (PF06455)    Oxidored_q1 (PF00361)    Oxidored_q1_N (PF00662)   
Domain families : Pfam (NCBI)pfam06455    pfam00361    pfam00662   
DMDM4540
Blocks (Seattle)P03915
IPIIPI00008511   IPI00973573   
Protein Interaction databases
DIP (DOE-UCLA)P03915
IntAct (EBI)P03915
REACTOMEND5
Protein Interaction Database4540
BioGRIDND5
InParanoidP03915
Interologous Interaction database P03915
IntegromeDBND5
Polymorphism : SNP, mutations, diseases
SNP Single Nucleotide Polymorphism (NCBI)ND5
SNP (GeneSNP Utah)ND5
SNP : HGBaseND5
Genetic variants : HAPMAPND5
Mutations and Diseases : HGMDMT-ND5
OMIM
GENETests
Disease Genetic AssociationMT-ND5
Huge Navigator MT-ND5 [HugePedia]  MT-ND5 [HugeCancerGEM]
Genomic VariantsND5  ND5 [DGVbeta]
snp3D : Map Gene to Disease4540
General knowledge
Homologs : HomoloGeneND5
Homology/Alignments : Family Browser (UCSC)ND5
Phylogenetic Trees/Animal Genes : TreeFamMT-ND5
Catalytic activity : Enzyme1.6.5.3 [ Enzyme-Expasy ]   1.6.5.3 [ Enzyme-SRS ]   1.6.5.3 [ IntEnz-EBI ]   1.6.5.3 [ BRENDA ]   1.6.5.3 [ KEGG ]   
Chemical/Protein Interactions : CTD4540
Chemical/Pharm GKB GenePA31265
Clinical trialND5
Ontology : AmiGOresponse to hypoxia  mitochondrial inner membrane  mitochondrial respiratory chain complex I  mitochondrial respiratory chain complex I  mitochondrial electron transport, NADH to ubiquinone  NADH dehydrogenase (ubiquinone) activity  response to organic nitrogen  integral to membrane  respiratory electron transport chain  response to hydrogen peroxide  small molecule metabolic process  
Ontology : EGO-EBIresponse to hypoxia  mitochondrial inner membrane  mitochondrial respiratory chain complex I  mitochondrial respiratory chain complex I  mitochondrial electron transport, NADH to ubiquinone  NADH dehydrogenase (ubiquinone) activity  response to organic nitrogen  integral to membrane  respiratory electron transport chain  response to hydrogen peroxide  small molecule metabolic process  
Other databases
Probes
Litterature
PubMed46 Pubmed reference(s) in Entrez
PubGeneND5
iHOPND5
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written09-2002Dessen P, Le Minor S
Updated01-2013Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed May 1 12:50:43 CEST 2013
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