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ND5 (NADH dehydrogenase, subunit 5 (complex I))

Identity

HGNC (Hugo) MT-ND5
LocusID (NCBI) 4540
Atlas_Id 55927
Location M  [Link to chromosome band ]
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)MT-ND5   7461
Cards
Entrez_Gene (NCBI)ND5  4540  NADH dehydrogenase, subunit 5 (complex I)
AliasesMTND5
GeneCards (Weizmann)ND5
Ensembl hg19 (Hinxton) [Gene_View]  - [Contig_View]  ND5 [Vega]
Ensembl hg38 (Hinxton) [Gene_View]  - [Contig_View]  ND5 [Vega]
TCGA cBioPortalND5
AceView (NCBI)ND5
Genatlas (Paris)ND5
WikiGenes4540
SOURCE (Princeton)ND5
Genetics Home Reference (NIH)ND5
Genomic and cartography
GoldenPath hg19 (UCSC)ND5  -  
GoldenPath hg38 (UCSC)ND5  -  
EnsemblND5 - [CytoView hg19]  ND5 - [CytoView hg38]
Mapping of homologs : NCBIND5 [Mapview hg19]  ND5 [Mapview hg38]
OMIM516005   535000   540000   
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)ND5
Gene ExpressionND5 [ NCBI-GEO ]   ND5 [ EBI - ARRAY_EXPRESS ]   ND5 [ SEEK ]   ND5 [ MEM ]
Gene Expression Viewer (FireBrowse)ND5 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)4540
GTEX Portal (Tissue expression)ND5
Protein : pattern, domain, 3D structure
UniProt/SwissProtP03915   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtP03915  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProP03915
Splice isoforms : SwissVarP03915
Catalytic activity : Enzyme1.6.5.3 [ Enzyme-Expasy ]   1.6.5.31.6.5.3 [ IntEnz-EBI ]   1.6.5.3 [ BRENDA ]   1.6.5.3 [ KEGG ]   
PhosPhoSitePlusP03915
Domains : Interpro (EBI)NADH_DH_su5_C    NADHpl_OxRdtase_5    ND/Mrp_mem    Proton_antipo_N   
Domain families : Pfam (Sanger)NADH5_C (PF06455)    Proton_antipo_M (PF00361)    Proton_antipo_N (PF00662)   
Domain families : Pfam (NCBI)pfam06455    pfam00361    pfam00662   
Conserved Domain (NCBI)ND5
DMDM Disease mutations4540
Blocks (Seattle)ND5
SuperfamilyP03915
Peptide AtlasP03915
IPIIPI00008511   IPI00973573   
Protein Interaction databases
DIP (DOE-UCLA)P03915
IntAct (EBI)P03915
BioGRIDND5
STRING (EMBL)ND5
ZODIACND5
Ontologies - Pathways
QuickGOP03915
Ontology : AmiGO
Ontology : EGO-EBI
Pathways : KEGGOxidative phosphorylation    Parkinson's disease   
NDEx NetworkND5
Atlas of Cancer Signalling NetworkND5
Wikipedia pathwaysND5
Orthology - Evolution
OrthoDB4540
Phylogenetic Trees/Animal Genes : TreeFamMT-ND5
HOVERGENP03915
HOGENOMP03915
Homologs : HomoloGeneND5
Homology/Alignments : Family Browser (UCSC)ND5
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerND5 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ND5
dbVarND5
ClinVarND5
1000_GenomesND5 
Exome Variant ServerND5
ExAC (Exome Aggregation Consortium)ND5 (select the gene name)
Genetic variants : HAPMAP4540
Genomic Variants (DGV)ND5 [DGVbeta]
DECIPHER (Syndromes)-  
CONAN: Copy Number AnalysisND5 
Mutations
ICGC Data PortalMT-ND5 
TCGA Data PortalMT-ND5 
Broad Tumor PortalMT-ND5
OASIS PortalMT-ND5 [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDMT-ND5
BioMutasearch ND5
DgiDB (Drug Gene Interaction Database)ND5
DoCM (Curated mutations)ND5 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)ND5 (select a term)
intoGenND5
Cancer3DND5(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM516005    535000    540000   
Orphanet
MedgenND5
Genetic Testing Registry ND5
NextProtP03915 [Medical]
TSGene4540
GENETestsND5
Huge Navigator MT-ND5 [HugePedia]
snp3D : Map Gene to Disease4540
BioCentury BCIQND5
ClinGenND5
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD4540
Chemical/Pharm GKB GenePA31265
Clinical trialND5
Miscellaneous
canSAR (ICR)ND5 (select the gene name)
Probes
Litterature
PubMed53 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineND5
EVEXND5
GoPubMedND5
iHOPND5
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Fri Nov 18 19:45:35 CET 2016

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