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ND6 (NADH dehydrogenase, subunit 6 (complex I))

Identity

Other aliasMTND6
HGNC (Hugo) MT-ND6
LocusID (NCBI) 4541
Atlas_Id 53849
Location -  [Link to chromosome band ]
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)MT-ND6   7462
Cards
Entrez_Gene (NCBI)ND6  4541  NADH dehydrogenase, subunit 6 (complex I)
AliasesMTND6
GeneCards (Weizmann)ND6
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]   [Sequence]  - [Contig_View]  ND6 [Vega]
TCGA cBioPortalND6
AceView (NCBI)ND6
Genatlas (Paris)ND6
WikiGenes4541
SOURCE (Princeton)ND6
Genetics Home Reference (NIH)ND6
Genomic and cartography
GoldenPath hg38 (UCSC)ND6  -  
GoldenPath hg19 (UCSC)ND6  -  
EnsemblND6 - [CytoView hg19]  ND6 - [CytoView hg38]
Mapping of homologs : NCBIND6 [Mapview hg19]  ND6 [Mapview hg38]
OMIM516006   535000   540000   
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)ND6
Gene ExpressionND6 [ NCBI-GEO ]   ND6 [ EBI - ARRAY_EXPRESS ]   ND6 [ SEEK ]   ND6 [ MEM ]
Gene Expression Viewer (FireBrowse)ND6 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)4541
GTEX Portal (Tissue expression)ND6
Protein : pattern, domain, 3D structure
UniProt/SwissProtP03923   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtP03923  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProP03923
Splice isoforms : SwissVarP03923
Catalytic activity : Enzyme1.6.5.3 [ Enzyme-Expasy ]   1.6.5.31.6.5.3 [ IntEnz-EBI ]   1.6.5.3 [ BRENDA ]   1.6.5.3 [ KEGG ]   
PhosPhoSitePlusP03923
Domains : Interpro (EBI)NADH_UbQ/plastoQ_OxRdtase_su6   
Domain families : Pfam (Sanger)Oxidored_q3 (PF00499)   
Domain families : Pfam (NCBI)pfam00499   
Conserved Domain (NCBI)ND6
DMDM Disease mutations4541
Blocks (Seattle)ND6
SuperfamilyP03923
Peptide AtlasP03923
IPIIPI00922885   IPI00922222   IPI01021456   
Protein Interaction databases
DIP (DOE-UCLA)P03923
IntAct (EBI)P03923
BioGRIDND6
STRING (EMBL)ND6
ZODIACND6
Ontologies - Pathways
QuickGOP03923
Ontology : AmiGOmitochondrion  mitochondrial inner membrane  mitochondrial electron transport, NADH to ubiquinone  NADH dehydrogenase (ubiquinone) activity  integral component of membrane  mitochondrial respiratory chain complex I assembly  response to nicotine  response to cocaine  response to hydrogen peroxide  respiratory chain  
Ontology : EGO-EBImitochondrion  mitochondrial inner membrane  mitochondrial electron transport, NADH to ubiquinone  NADH dehydrogenase (ubiquinone) activity  integral component of membrane  mitochondrial respiratory chain complex I assembly  response to nicotine  response to cocaine  response to hydrogen peroxide  respiratory chain  
NDEx NetworkND6
Atlas of Cancer Signalling NetworkND6
Wikipedia pathwaysND6
Orthology - Evolution
OrthoDB4541
Phylogenetic Trees/Animal Genes : TreeFamMT-ND6
HOVERGENP03923
HOGENOMP03923
Homologs : HomoloGeneND6
Homology/Alignments : Family Browser (UCSC)ND6
Gene fusions - Rearrangements
Fusion : QuiverND6
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerND6 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ND6
dbVarND6
ClinVarND6
1000_GenomesND6 
Exome Variant ServerND6
Genetic variants : HAPMAP4541
Genomic Variants (DGV)ND6 [DGVbeta]
DECIPHERND6 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisND6 
Mutations
ICGC Data PortalMT-ND6 
TCGA Data PortalMT-ND6 
Broad Tumor PortalMT-ND6
OASIS PortalMT-ND6 [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDMT-ND6
BioMutasearch ND6
DgiDB (Drug Gene Interaction Database)ND6
DoCM (Curated mutations)ND6 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)ND6 (select a term)
intoGenND6
Cancer3DND6(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM516006    535000    540000   
Orphanet
DisGeNETND6
MedgenND6
Genetic Testing Registry ND6
NextProtP03923 [Medical]
TSGene4541
GENETestsND6
Target ValidationND6
Huge Navigator MT-ND6 [HugePedia]
snp3D : Map Gene to Disease4541
BioCentury BCIQND6
ClinGenND6
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD4541
Chemical/Pharm GKB GenePA31266
Clinical trialND6
Miscellaneous
canSAR (ICR)ND6 (select the gene name)
Probes
Litterature
PubMed34 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineND6
EVEXND6
GoPubMedND6
iHOPND6
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Fri Jun 22 16:39:43 CEST 2018

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