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NDFIP2 (Nedd4 family interacting protein 2)

Identity

Alias (NCBI)N4WBP5A
HGNC (Hugo) NDFIP2
HGNC Alias symbKIAA1165
N4wbp5a
LocusID (NCBI) 54602
Atlas_Id 70749
Location 13q31.1  [Link to chromosome band 13q31]
Location_base_pair Starts at 79481124 and ends at 79556077 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
NBEA (13q13.3) / NDFIP2 (13q31.1)NDFIP2 (13q31.1) / MKLN1 (7q32.3)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

 

Nomenclature
HGNC (Hugo)NDFIP2   18537
Cards
Entrez_Gene (NCBI)NDFIP2    Nedd4 family interacting protein 2
AliasesN4WBP5A
GeneCards (Weizmann)NDFIP2
Ensembl hg19 (Hinxton)ENSG00000102471 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000102471 [Gene_View]  ENSG00000102471 [Sequence]  chr13:79481124-79556077 [Contig_View]  NDFIP2 [Vega]
ICGC DataPortalENSG00000102471
TCGA cBioPortalNDFIP2
AceView (NCBI)NDFIP2
Genatlas (Paris)NDFIP2
SOURCE (Princeton)NDFIP2
Genetics Home Reference (NIH)NDFIP2
Genomic and cartography
GoldenPath hg38 (UCSC)NDFIP2  -     chr13:79481124-79556077 +  13q31.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)NDFIP2  -     13q31.1   [Description]    (hg19-Feb_2009)
GoldenPathNDFIP2 - 13q31.1 [CytoView hg19]  NDFIP2 - 13q31.1 [CytoView hg38]
ImmunoBaseENSG00000102471
Genome Data Viewer NCBINDFIP2 [Mapview hg19]  
OMIM610041   
Gene and transcription
Genbank (Entrez)AB032991 AB097019 AB097028 AB097029 AB097030
RefSeq transcript (Entrez)NM_001161407 NM_001394685 NM_019080
Consensus coding sequences : CCDS (NCBI)NDFIP2
Gene ExpressionNDFIP2 [ NCBI-GEO ]   NDFIP2 [ EBI - ARRAY_EXPRESS ]   NDFIP2 [ SEEK ]   NDFIP2 [ MEM ]
Gene Expression Viewer (FireBrowse)NDFIP2 [ Firebrowse - Broad ]
GenevisibleExpression of NDFIP2 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)54602
GTEX Portal (Tissue expression)NDFIP2
Human Protein AtlasENSG00000102471-NDFIP2 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9NV92   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9NV92  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9NV92
PhosPhoSitePlusQ9NV92
Domains : Interpro (EBI)NEDD4/Bsd2   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)NDFIP2
SuperfamilyQ9NV92
AlphaFold pdb e-kbQ9NV92   
Human Protein Atlas [tissue]ENSG00000102471-NDFIP2 [tissue]
HPRD17629
Protein Interaction databases
DIP (DOE-UCLA)Q9NV92
IntAct (EBI)Q9NV92
BioGRIDNDFIP2
STRING (EMBL)NDFIP2
ZODIACNDFIP2
Ontologies - Pathways
QuickGOQ9NV92
Ontology : AmiGOGolgi membrane  protein binding  cytoplasm  mitochondrion  endoplasmic reticulum  endoplasmic reticulum  Golgi apparatus  Golgi apparatus  ubiquitin-dependent protein catabolic process  vacuolar transport  negative regulation of gene expression  integral component of membrane  metal ion transport  positive regulation of protein ubiquitination  positive regulation of protein ubiquitination  negative regulation of transporter activity  multivesicular body membrane  positive regulation of I-kappaB kinase/NF-kappaB signaling  intracellular membrane-bounded organelle  perinuclear region of cytoplasm  perinuclear region of cytoplasm  WW domain binding  WW domain binding  negative regulation of protein transport  
Ontology : EGO-EBIGolgi membrane  protein binding  cytoplasm  mitochondrion  endoplasmic reticulum  endoplasmic reticulum  Golgi apparatus  Golgi apparatus  ubiquitin-dependent protein catabolic process  vacuolar transport  negative regulation of gene expression  integral component of membrane  metal ion transport  positive regulation of protein ubiquitination  positive regulation of protein ubiquitination  negative regulation of transporter activity  multivesicular body membrane  positive regulation of I-kappaB kinase/NF-kappaB signaling  intracellular membrane-bounded organelle  perinuclear region of cytoplasm  perinuclear region of cytoplasm  WW domain binding  WW domain binding  negative regulation of protein transport  
NDEx NetworkNDFIP2
Atlas of Cancer Signalling NetworkNDFIP2
Wikipedia pathwaysNDFIP2
Orthology - Evolution
OrthoDB54602
GeneTree (enSembl)ENSG00000102471
Phylogenetic Trees/Animal Genes : TreeFamNDFIP2
Homologs : HomoloGeneNDFIP2
Homology/Alignments : Family Browser (UCSC)NDFIP2
Gene fusions - Rearrangements
Fusion : QuiverNDFIP2
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerNDFIP2 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)NDFIP2
dbVarNDFIP2
ClinVarNDFIP2
MonarchNDFIP2
1000_GenomesNDFIP2 
Exome Variant ServerNDFIP2
GNOMAD BrowserENSG00000102471
Varsome BrowserNDFIP2
ACMGNDFIP2 variants
VarityQ9NV92
Genomic Variants (DGV)NDFIP2 [DGVbeta]
DECIPHERNDFIP2 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisNDFIP2 
Mutations
ICGC Data PortalNDFIP2 
TCGA Data PortalNDFIP2 
Broad Tumor PortalNDFIP2
OASIS PortalNDFIP2 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICNDFIP2  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DNDFIP2
Mutations and Diseases : HGMDNDFIP2
LOVD (Leiden Open Variation Database)[gene] [transcripts] [variants]
BioMutaNDFIP2
DgiDB (Drug Gene Interaction Database)NDFIP2
DoCM (Curated mutations)NDFIP2
CIViC (Clinical Interpretations of Variants in Cancer)NDFIP2
Cancer3DNDFIP2
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM610041   
Orphanet
DisGeNETNDFIP2
MedgenNDFIP2
Genetic Testing Registry NDFIP2
NextProtQ9NV92 [Medical]
GENETestsNDFIP2
Target ValidationNDFIP2
Huge Navigator NDFIP2 [HugePedia]
ClinGenNDFIP2
Clinical trials, drugs, therapy
MyCancerGenomeNDFIP2
Protein Interactions : CTDNDFIP2
Pharm GKB GenePA134953250
PharosQ9NV92
Clinical trialNDFIP2
Miscellaneous
canSAR (ICR)NDFIP2
HarmonizomeNDFIP2
DataMed IndexNDFIP2
Probes
Litterature
PubMed35 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXNDFIP2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Oct 4 16:12:29 CEST 2021

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