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NDP-AS1 (NDP antisense RNA 1)

Identity

Alias_namesNDP antisense RNA 1 (non-protein coding)
Other alias-
HGNC (Hugo) NDP-AS1
LocusID (NCBI) 100873919
Atlas_Id 80143
Location Xp11.3  [Link to chromosome band Xp11]
Location_base_pair Starts at 43949732 and ends at 43971552 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)NDP-AS1   40395
Cards
Entrez_Gene (NCBI)NDP-AS1  100873919  NDP antisense RNA 1
Aliases
GeneCards (Weizmann)NDP-AS1
Ensembl hg19 (Hinxton)ENSG00000236276 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000236276 [Gene_View]  chrX:43949732-43971552 [Contig_View]  NDP-AS1 [Vega]
ICGC DataPortalENSG00000236276
TCGA cBioPortalNDP-AS1
AceView (NCBI)NDP-AS1
Genatlas (Paris)NDP-AS1
WikiGenes100873919
SOURCE (Princeton)NDP-AS1
Genetics Home Reference (NIH)NDP-AS1
Genomic and cartography
GoldenPath hg38 (UCSC)NDP-AS1  -     chrX:43949732-43971552 +  Xp11.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)NDP-AS1  -     Xp11.3   [Description]    (hg19-Feb_2009)
EnsemblNDP-AS1 - Xp11.3 [CytoView hg19]  NDP-AS1 - Xp11.3 [CytoView hg38]
Mapping of homologs : NCBINDP-AS1 [Mapview hg19]  NDP-AS1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)NDP-AS1
Alternative Splicing GalleryENSG00000236276
Gene ExpressionNDP-AS1 [ NCBI-GEO ]   NDP-AS1 [ EBI - ARRAY_EXPRESS ]   NDP-AS1 [ SEEK ]   NDP-AS1 [ MEM ]
Gene Expression Viewer (FireBrowse)NDP-AS1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100873919
GTEX Portal (Tissue expression)NDP-AS1
Human Protein AtlasENSG00000236276-NDP-AS1 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)NDP-AS1
DMDM Disease mutations100873919
Blocks (Seattle)NDP-AS1
Human Protein Atlas [tissue]ENSG00000236276-NDP-AS1 [tissue]
Protein Interaction databases
FunCoupENSG00000236276
BioGRIDNDP-AS1
STRING (EMBL)NDP-AS1
ZODIACNDP-AS1
Ontologies - Pathways
Huge Navigator NDP-AS1 [HugePedia]
snp3D : Map Gene to Disease100873919
BioCentury BCIQNDP-AS1
ClinGenNDP-AS1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100873919
Clinical trialNDP-AS1
Miscellaneous
canSAR (ICR)NDP-AS1 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineNDP-AS1
EVEXNDP-AS1
GoPubMedNDP-AS1
iHOPNDP-AS1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Nov 20 20:02:59 CET 2017

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