Atlas of Genetics and Cytogenetics in Oncology and Haematology


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NDST1-AS1 (NDST1 antisense RNA 1)

Identity

Other alias-
HGNC (Hugo) NDST1-AS1
LocusID (NCBI) 102546298
Atlas_Id 79180
Location 5q33.1  [Link to chromosome band 5q33]
Location_base_pair Starts at 150475516 and ends at 150485992 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)NDST1-AS1   52899
Cards
Entrez_Gene (NCBI)NDST1-AS1  102546298  NDST1 antisense RNA 1
Aliases
GeneCards (Weizmann)NDST1-AS1
Ensembl hg19 (Hinxton)ENSG00000254333 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000254333 [Gene_View]  ENSG00000254333 [Sequence]  chr5:150475516-150485992 [Contig_View]  NDST1-AS1 [Vega]
ICGC DataPortalENSG00000254333
TCGA cBioPortalNDST1-AS1
AceView (NCBI)NDST1-AS1
Genatlas (Paris)NDST1-AS1
WikiGenes102546298
SOURCE (Princeton)NDST1-AS1
Genetics Home Reference (NIH)NDST1-AS1
Genomic and cartography
GoldenPath hg38 (UCSC)NDST1-AS1  -     chr5:150475516-150485992 -  5q33.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)NDST1-AS1  -     5q33.1   [Description]    (hg19-Feb_2009)
NDST1-AS1 - 5q33.1 [CytoView hg19]  NDST1-AS1 - 5q33.1 [CytoView hg38]
Mapping of homologs : NCBINDST1-AS1 [Mapview hg19]  NDST1-AS1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AW025248
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)NDST1-AS1
Cluster EST : UnigeneHs.570892 [ NCBI ]
CGAP (NCI)Hs.570892
Alternative Splicing GalleryENSG00000254333
Gene ExpressionNDST1-AS1 [ NCBI-GEO ]   NDST1-AS1 [ EBI - ARRAY_EXPRESS ]   NDST1-AS1 [ SEEK ]   NDST1-AS1 [ MEM ]
Gene Expression Viewer (FireBrowse)NDST1-AS1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)102546298
GTEX Portal (Tissue expression)NDST1-AS1
Human Protein AtlasENSG00000254333-NDST1-AS1 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)NDST1-AS1
DMDM Disease mutations102546298
Blocks (Seattle)NDST1-AS1
Human Protein Atlas [tissue]ENSG00000254333-NDST1-AS1 [tissue]
Protein Interaction databases
FunCoupENSG00000254333
BioGRIDNDST1-AS1
STRING (EMBL)NDST1-AS1
ZODIACNDST1-AS1
Ontologies - Pathways
Huge Navigator NDST1-AS1 [HugePedia]
snp3D : Map Gene to Disease102546298
BioCentury BCIQNDST1-AS1
ClinGenNDST1-AS1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD102546298
Clinical trialNDST1-AS1
Miscellaneous
canSAR (ICR)NDST1-AS1 (select the gene name)
DataMed IndexNDST1-AS1
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineNDST1-AS1
EVEXNDST1-AS1
GoPubMedNDST1-AS1
iHOPNDST1-AS1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Apr 30 13:50:14 CEST 2019

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