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NDUFA3 (NADH:ubiquinone oxidoreductase subunit A3)

Identity

Alias_namesNADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 3 (9kD, B9)
NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 3, 9kDa
Alias_symbol (synonym)B9
Other aliasCI-B9
HGNC (Hugo) NDUFA3
LocusID (NCBI) 4696
Atlas_Id 70755
Location 19q13.42  [Link to chromosome band 19q13]
Location_base_pair Starts at 54102852 and ends at 54106974 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

/TR>J
Nomenclature
HGNC (Hugo)NDUFA3   7686
Cards
Entrez_Gene (NCBI)NDUFA3  4696  NADH:ubiquinone oxidoreductase subunit A3
AliasesB9; CI-B9
GeneCards (Weizmann)NDUFA3
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr19:54102852-54106974 [Contig_View]  NDUFA3 [Vega]
TCGA cBioPortalNDUFA3
AceView (NCBI)NDUFA3
Genatlas (Paris)NDUFA3
WikiGenes4696
SOURCE (Princeton)NDUFA3
Genetics Home Reference (NIH)NDUFA3
Genomic and cartography
GoldenPath hg38 (UCSC)NDUFA3  -     chr19:54102852-54106974 +  19q13.42   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)NDUFA3  -     19q13.42   [Description]    (hg19-Feb_2009)
EnsemblNDUFA3 - 19q13.42 [CytoView hg19]  NDUFA3 - 19q13.42 [CytoView hg38]
Mapping of homologs : NCBINDUFA3 [Mapview hg19]  NDUFA3 [Mapview hg38]
OMIM603832   
Gene and transcription
Genbank (Entrez)AF044955 AF070653 AK289489 BC011021 BC022369
RefSeq transcript (Entrez)NM_004542
RefSeq genomic (Entrez)NC_000019 NC_018930 NT_187693 NW_003571054 NW_003571055 NW_003571056 NW_003571057 NW_003571058 NW_003571059 NW_003571060 NW_003571061
Consensus coding sequences : CCDS (NCBI)NDUFA3
Cluster EST : UnigeneHs.198269 [ NCBI ]
CGAP (NCI)Hs.198269
Gene ExpressionNDUFA3 [ NCBI-GEO ]   NDUFA3 [ EBI - ARRAY_EXPRESS ]   NDUFA3 [ SEEK ]   NDUFA3 [ MEM ]
Gene Expression Viewer (FireBrowse)NDUFA3 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)4696
GTEX Portal (Tissue expression)NDUFA3
Protein : pattern, domain, 3D structure
UniProt/SwissProtO95167   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtO95167  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProO95167
Splice isoforms : SwissVarO95167
PhosPhoSitePlusO95167
Domains : Interpro (EBI)NDUFA3   
Domain families : Pfam (Sanger)NADHdh_A3 (PF14987)   
Domain families : Pfam (NCBI)pfam14987   
Conserved Domain (NCBI)NDUFA3
DMDM Disease mutations4696
Blocks (Seattle)NDUFA3
SuperfamilyO95167
Peptide AtlasO95167
HPRD04830
IPIIPI00028881   IPI00853268   IPI00853321   IPI00853139   IPI00879519   IPI00894135   IPI00925332   
Protein Interaction databases
DIP (DOE-UCLA)O95167
IntAct (EBI)O95167
BioGRIDNDUFA3
STRING (EMBL)NDUFA3
ZODIACNDUFA3
Ontologies - Pathways
QuickGOO95167Ontology : AmiGOmitochondrion  mitochondrial inner membrane  mitochondrial respiratory chain complex I  mitochondrial respiratory chain complex I  mitochondrial electron transport, NADH to ubiquinone  mitochondrial electron transport, NADH to ubiquinone  NADH dehydrogenase (ubiquinone) activity  integral component of membrane  mitochondrial respiratory chain complex I assembly  
Ontology : EGO-EBImitochondrion  mitochondrial inner membrane  mitochondrial respiratory chain complex I  mitochondrial respiratory chain complex I  mitochondrial electron transport, NADH to ubiquinone  mitochondrial electron transport, NADH to ubiquinone  NADH dehydrogenase (ubiquinone) activity  integral component of membrane  mitochondrial respiratory chain complex I assembly  
Pathways : KEGGOxidative phosphorylation    Non-alcoholic fatty liver disease (NAFLD)    Alzheimer's disease    Parkinson's disease    Huntington's disease   
NDEx NetworkNDUFA3
Atlas of Cancer Signalling NetworkNDUFA3
Wikipedia pathwaysNDUFA3
Orthology - Evolution
OrthoDB4696
Phylogenetic Trees/Animal Genes : TreeFamNDUFA3
HOVERGENO95167
HOGENOMO95167
Homologs : HomoloGeneNDUFA3
Homology/Alignments : Family Browser (UCSC)NDUFA3
Gene fusions - Rearrangements
Tumor Fusion PortalNDUFA3
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerNDUFA3 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)NDUFA3
dbVarNDUFA3
ClinVarNDUFA3
1000_GenomesNDUFA3 
Exome Variant ServerNDUFA3
ExAC (Exome Aggregation Consortium)
Genetic variants : HAPMAP4696
Genomic Variants (DGV)NDUFA3 [DGVbeta]
DECIPHERNDUFA3 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisNDUFA3 
Mutations
ICGC Data PortalNDUFA3 
TCGA Data PortalNDUFA3 
Broad Tumor PortalNDUFA3
OASIS PortalNDUFA3 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICNDUFA3  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDNDUFA3
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
LOVD (Leiden Open Variation Database)MSeqDR-LSDB Mitochondrial Disease Locus Specific Database
BioMutasearch NDUFA3
DgiDB (Drug Gene Interaction Database)NDUFA3
DoCM (Curated mutations)NDUFA3 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)NDUFA3 (select a term)
intoGenNDUFA3
Cancer3DNDUFA3(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM603832   
Orphanet
DisGeNETNDUFA3
MedgenNDUFA3
Genetic Testing Registry NDUFA3
NextProtO95167 [Medical]
TSGene4696
GENETestsNDUFA3
Target ValidationNDUFA3
Huge Navigator NDUFA3 [HugePedia]
snp3D : Map Gene to Disease4696
BioCentury BCIQNDUFA3
ClinGenNDUFA3
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD4696
Chemical/Pharm GKB GenePA31492
Clinical trialNDUFA3
Miscellaneous
canSAR (ICR)NDUFA3 (select the gene name)
Probes
Litterature
PubMed16 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineNDUFA3
EVEXNDUFA3
GoPubMedNDUFA3
iHOPNDUFA3
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Nov 20 20:03:00 CET 2017

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