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NDUFA7 (NADH:ubiquinone oxidoreductase subunit A7)

Identity

Alias_namesNADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 7 (14.5kD, B14.5a)
NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 7, 14.5kDa
Alias_symbol (synonym)B14.5a
Other aliasCI-B14.5a
HGNC (Hugo) NDUFA7
LocusID (NCBI) 4701
Atlas_Id 70761
Location 19p13.2  [Link to chromosome band 19p13]
Location_base_pair Starts at 8311350 and ends at 8321413 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
NDUFA7 (19p13.2) / PRKCG (19q13.42)NDUFA7 (19p13.2) / PRKCSH (19p13.2)NDUFA7 (19p13.2) / SH2D3A (19p13.3)
NDUFA7 SH2D3ANDUFA7 PRKCG

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)NDUFA7   7691
Cards
Entrez_Gene (NCBI)NDUFA7  4701  NADH:ubiquinone oxidoreductase subunit A7
AliasesB14.5a; CI-B14.5a
GeneCards (Weizmann)NDUFA7
Ensembl hg19 (Hinxton)ENSG00000267855 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000267855 [Gene_View]  chr19:8311350-8321413 [Contig_View]  NDUFA7 [Vega]
ICGC DataPortalENSG00000267855
TCGA cBioPortalNDUFA7
AceView (NCBI)NDUFA7
Genatlas (Paris)NDUFA7
WikiGenes4701
SOURCE (Princeton)NDUFA7
Genetics Home Reference (NIH)NDUFA7
Genomic and cartography
GoldenPath hg38 (UCSC)NDUFA7  -     chr19:8311350-8321413 -  19p13.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)NDUFA7  -     19p13.2   [Description]    (hg19-Feb_2009)
EnsemblNDUFA7 - 19p13.2 [CytoView hg19]  NDUFA7 - 19p13.2 [CytoView hg38]
Mapping of homologs : NCBINDUFA7 [Mapview hg19]  NDUFA7 [Mapview hg38]
OMIM602139   
Gene and transcription
Genbank (Entrez)AF050637 AF054178 BC003102 BC107892 CD172691
RefSeq transcript (Entrez)NM_005001
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)NDUFA7
Cluster EST : UnigeneHs.333427 [ NCBI ]
CGAP (NCI)Hs.333427
Alternative Splicing GalleryENSG00000267855
Gene ExpressionNDUFA7 [ NCBI-GEO ]   NDUFA7 [ EBI - ARRAY_EXPRESS ]   NDUFA7 [ SEEK ]   NDUFA7 [ MEM ]
Gene Expression Viewer (FireBrowse)NDUFA7 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)4701
GTEX Portal (Tissue expression)NDUFA7
Human Protein AtlasENSG00000267855-NDUFA7 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtO95182   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtO95182  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProO95182
Splice isoforms : SwissVarO95182
PhosPhoSitePlusO95182
Domains : Interpro (EBI)NADH-UbQ_OxRdtase_B14.5a_su   
Domain families : Pfam (Sanger)CI-B14_5a (PF07347)   
Domain families : Pfam (NCBI)pfam07347   
Conserved Domain (NCBI)NDUFA7
DMDM Disease mutations4701
Blocks (Seattle)NDUFA7
SuperfamilyO95182
Human Protein Atlas [tissue]ENSG00000267855-NDUFA7 [tissue]
Peptide AtlasO95182
HPRD11885
IPIIPI00452731   
Protein Interaction databases
DIP (DOE-UCLA)O95182
IntAct (EBI)O95182
FunCoupENSG00000267855
BioGRIDNDUFA7
STRING (EMBL)NDUFA7
ZODIACNDUFA7
Ontologies - Pathways
QuickGOO95182
Ontology : AmiGOstructural constituent of ribosome  mitochondrion  mitochondrial inner membrane  mitochondrial respiratory chain complex I  mitochondrial respiratory chain complex I  mitochondrial ribosome  mitochondrial electron transport, NADH to ubiquinone  mitochondrial electron transport, NADH to ubiquinone  mitochondrial electron transport, NADH to ubiquinone  NADH dehydrogenase (ubiquinone) activity  mitochondrial translation  mitochondrial respiratory chain complex I assembly  
Ontology : EGO-EBIstructural constituent of ribosome  mitochondrion  mitochondrial inner membrane  mitochondrial respiratory chain complex I  mitochondrial respiratory chain complex I  mitochondrial ribosome  mitochondrial electron transport, NADH to ubiquinone  mitochondrial electron transport, NADH to ubiquinone  mitochondrial electron transport, NADH to ubiquinone  NADH dehydrogenase (ubiquinone) activity  mitochondrial translation  mitochondrial respiratory chain complex I assembly  
Pathways : KEGGOxidative phosphorylation    Non-alcoholic fatty liver disease (NAFLD)    Alzheimer's disease    Parkinson's disease    Huntington's disease   
NDEx NetworkNDUFA7
Atlas of Cancer Signalling NetworkNDUFA7
Wikipedia pathwaysNDUFA7
Orthology - Evolution
OrthoDB4701
GeneTree (enSembl)ENSG00000267855
Phylogenetic Trees/Animal Genes : TreeFamNDUFA7
HOVERGENO95182
HOGENOMO95182
Homologs : HomoloGeneNDUFA7
Homology/Alignments : Family Browser (UCSC)NDUFA7
Gene fusions - Rearrangements
Fusion: TCGA_MDACCNDUFA7 SH2D3A
Fusion: TCGA_MDACCNDUFA7 PRKCG
Tumor Fusion PortalNDUFA7
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerNDUFA7 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)NDUFA7
dbVarNDUFA7
ClinVarNDUFA7
1000_GenomesNDUFA7 
Exome Variant ServerNDUFA7
ExAC (Exome Aggregation Consortium)ENSG00000267855
GNOMAD BrowserENSG00000267855
Genetic variants : HAPMAP4701
Genomic Variants (DGV)NDUFA7 [DGVbeta]
DECIPHERNDUFA7 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisNDUFA7 
Mutations
ICGC Data PortalNDUFA7 
TCGA Data PortalNDUFA7 
Broad Tumor PortalNDUFA7
OASIS PortalNDUFA7 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICNDUFA7  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDNDUFA7
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
LOVD (Leiden Open Variation Database)MSeqDR-LSDB Mitochondrial Disease Locus Specific Database
BioMutasearch NDUFA7
DgiDB (Drug Gene Interaction Database)NDUFA7
DoCM (Curated mutations)NDUFA7 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)NDUFA7 (select a term)
intoGenNDUFA7
Cancer3DNDUFA7(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM602139   
Orphanet
DisGeNETNDUFA7
MedgenNDUFA7
Genetic Testing Registry NDUFA7
NextProtO95182 [Medical]
TSGene4701
GENETestsNDUFA7
Target ValidationNDUFA7
Huge Navigator NDUFA7 [HugePedia]
snp3D : Map Gene to Disease4701
BioCentury BCIQNDUFA7
ClinGenNDUFA7
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD4701
Chemical/Pharm GKB GenePA31497
Clinical trialNDUFA7
Miscellaneous
canSAR (ICR)NDUFA7 (select the gene name)
Probes
Litterature
PubMed22 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineNDUFA7
EVEXNDUFA7
GoPubMedNDUFA7
iHOPNDUFA7
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Nov 20 20:03:01 CET 2017

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