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NDUFB10 (NADH:ubiquinone oxidoreductase subunit B10)

Identity

Alias_namesNADH dehydrogenase (ubiquinone) 1 beta subcomplex, 10 (22kD, PDSW)
NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 10, 22kDa
Alias_symbol (synonym)PDSW
Other alias
HGNC (Hugo) NDUFB10
LocusID (NCBI) 4716
Atlas_Id 70770
Location 16p13.3  [Link to chromosome band 16p13]
Location_base_pair Starts at 1959516 and ends at 1961975 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)NDUFB10   7696
Cards
Entrez_Gene (NCBI)NDUFB10  4716  NADH:ubiquinone oxidoreductase subunit B10
AliasesPDSW
GeneCards (Weizmann)NDUFB10
Ensembl hg19 (Hinxton)ENSG00000140990 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000140990 [Gene_View]  chr16:1959516-1961975 [Contig_View]  NDUFB10 [Vega]
ICGC DataPortalENSG00000140990
TCGA cBioPortalNDUFB10
AceView (NCBI)NDUFB10
Genatlas (Paris)NDUFB10
WikiGenes4716
SOURCE (Princeton)NDUFB10
Genetics Home Reference (NIH)NDUFB10
Genomic and cartography
GoldenPath hg38 (UCSC)NDUFB10  -     chr16:1959516-1961975 +  16p13.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)NDUFB10  -     16p13.3   [Description]    (hg19-Feb_2009)
EnsemblNDUFB10 - 16p13.3 [CytoView hg19]  NDUFB10 - 16p13.3 [CytoView hg38]
Mapping of homologs : NCBINDUFB10 [Mapview hg19]  NDUFB10 [Mapview hg38]
OMIM603843   
Gene and transcription
Genbank (Entrez)AF044954 AF067169 AF088991 AK291876 AK311744
RefSeq transcript (Entrez)NM_004548
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)NDUFB10
Cluster EST : UnigeneHs.513266 [ NCBI ]
CGAP (NCI)Hs.513266
Alternative Splicing GalleryENSG00000140990
Gene ExpressionNDUFB10 [ NCBI-GEO ]   NDUFB10 [ EBI - ARRAY_EXPRESS ]   NDUFB10 [ SEEK ]   NDUFB10 [ MEM ]
Gene Expression Viewer (FireBrowse)NDUFB10 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)4716
GTEX Portal (Tissue expression)NDUFB10
Human Protein AtlasENSG00000140990-NDUFB10 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtO96000   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtO96000  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProO96000
Splice isoforms : SwissVarO96000
PhosPhoSitePlusO96000
Domains : Interpro (EBI)NADH_UbQ_OxRdtase_su10   
Domain families : Pfam (Sanger)NDUFB10 (PF10249)   
Domain families : Pfam (NCBI)pfam10249   
Conserved Domain (NCBI)NDUFB10
DMDM Disease mutations4716
Blocks (Seattle)NDUFB10
SuperfamilyO96000
Human Protein Atlas [tissue]ENSG00000140990-NDUFB10 [tissue]
Peptide AtlasO96000
HPRD11958
IPIIPI00479905   IPI00074489   
Protein Interaction databases
DIP (DOE-UCLA)O96000
IntAct (EBI)O96000
FunCoupENSG00000140990
BioGRIDNDUFB10
STRING (EMBL)NDUFB10
ZODIACNDUFB10
Ontologies - Pathways
QuickGOO96000
Ontology : AmiGOprotein binding  mitochondrial inner membrane  mitochondrial respiratory chain complex I  mitochondrial respiratory chain complex I  mitochondrial electron transport, NADH to ubiquinone  mitochondrial electron transport, NADH to ubiquinone  NADH dehydrogenase (ubiquinone) activity  mitochondrial respiratory chain complex I assembly  extracellular exosome  
Ontology : EGO-EBIprotein binding  mitochondrial inner membrane  mitochondrial respiratory chain complex I  mitochondrial respiratory chain complex I  mitochondrial electron transport, NADH to ubiquinone  mitochondrial electron transport, NADH to ubiquinone  NADH dehydrogenase (ubiquinone) activity  mitochondrial respiratory chain complex I assembly  extracellular exosome  
Pathways : KEGGOxidative phosphorylation    Non-alcoholic fatty liver disease (NAFLD)    Alzheimer's disease    Parkinson's disease    Huntington's disease   
NDEx NetworkNDUFB10
Atlas of Cancer Signalling NetworkNDUFB10
Wikipedia pathwaysNDUFB10
Orthology - Evolution
OrthoDB4716
GeneTree (enSembl)ENSG00000140990
Phylogenetic Trees/Animal Genes : TreeFamNDUFB10
HOVERGENO96000
HOGENOMO96000
Homologs : HomoloGeneNDUFB10
Homology/Alignments : Family Browser (UCSC)NDUFB10
Gene fusions - Rearrangements
Tumor Fusion PortalNDUFB10
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerNDUFB10 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)NDUFB10
dbVarNDUFB10
ClinVarNDUFB10
1000_GenomesNDUFB10 
Exome Variant ServerNDUFB10
ExAC (Exome Aggregation Consortium)ENSG00000140990
GNOMAD BrowserENSG00000140990
Genetic variants : HAPMAP4716
Genomic Variants (DGV)NDUFB10 [DGVbeta]
DECIPHERNDUFB10 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisNDUFB10 
Mutations
ICGC Data PortalNDUFB10 
TCGA Data PortalNDUFB10 
Broad Tumor PortalNDUFB10
OASIS PortalNDUFB10 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICNDUFB10  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDNDUFB10
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
LOVD (Leiden Open Variation Database)MSeqDR-LSDB Mitochondrial Disease Locus Specific Database
BioMutasearch NDUFB10
DgiDB (Drug Gene Interaction Database)NDUFB10
DoCM (Curated mutations)NDUFB10 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)NDUFB10 (select a term)
intoGenNDUFB10
Cancer3DNDUFB10(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM603843   
Orphanet
DisGeNETNDUFB10
MedgenNDUFB10
Genetic Testing Registry NDUFB10
NextProtO96000 [Medical]
TSGene4716
GENETestsNDUFB10
Target ValidationNDUFB10
Huge Navigator NDUFB10 [HugePedia]
snp3D : Map Gene to Disease4716
BioCentury BCIQNDUFB10
ClinGenNDUFB10
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD4716
Chemical/Pharm GKB GenePA31502
Clinical trialNDUFB10
Miscellaneous
canSAR (ICR)NDUFB10 (select the gene name)
Probes
Litterature
PubMed26 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineNDUFB10
EVEXNDUFB10
GoPubMedNDUFB10
iHOPNDUFB10
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Nov 21 13:33:59 CET 2017

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