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NDUFB11 (NADH:ubiquinone oxidoreductase subunit B11)

Identity

Alias_namesNADH dehydrogenase (ubiquinone) 1 beta subcomplex, 11, 17.3kDa
Alias_symbol (synonym)ESSS
NP17.3
Np15
Other aliasCI-ESSS
P17.3
HGNC (Hugo) NDUFB11
LocusID (NCBI) 54539
Atlas_Id 70771
Location Xp11.3  [Link to chromosome band Xp11]
Location_base_pair Starts at 47142216 and ends at 47145210 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
MAN2B1 (19p13.2) / NDUFB11 (Xp11.23)NDUFB11 (Xp11.23) / NASP (1p34.1)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)NDUFB11   20372
Cards
Entrez_Gene (NCBI)NDUFB11  54539  NADH:ubiquinone oxidoreductase subunit B11
AliasesCI-ESSS; ESSS; NP17.3; Np15; 
P17.3
GeneCards (Weizmann)NDUFB11
Ensembl hg19 (Hinxton)ENSG00000147123 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000147123 [Gene_View]  chrX:47142216-47145210 [Contig_View]  NDUFB11 [Vega]
ICGC DataPortalENSG00000147123
TCGA cBioPortalNDUFB11
AceView (NCBI)NDUFB11
Genatlas (Paris)NDUFB11
WikiGenes54539
SOURCE (Princeton)NDUFB11
Genetics Home Reference (NIH)NDUFB11
Genomic and cartography
GoldenPath hg38 (UCSC)NDUFB11  -     chrX:47142216-47145210 -  Xp11.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)NDUFB11  -     Xp11.3   [Description]    (hg19-Feb_2009)
EnsemblNDUFB11 - Xp11.3 [CytoView hg19]  NDUFB11 - Xp11.3 [CytoView hg38]
Mapping of homologs : NCBINDUFB11 [Mapview hg19]  NDUFB11 [Mapview hg38]
OMIM300403   300952   
Gene and transcription
Genbank (Entrez)AA287166 AF044213 AF134476 AF251063 AK000501
RefSeq transcript (Entrez)NM_001135998 NM_019056
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)NDUFB11
Cluster EST : UnigeneHs.521969 [ NCBI ]
CGAP (NCI)Hs.521969
Alternative Splicing GalleryENSG00000147123
Gene ExpressionNDUFB11 [ NCBI-GEO ]   NDUFB11 [ EBI - ARRAY_EXPRESS ]   NDUFB11 [ SEEK ]   NDUFB11 [ MEM ]
Gene Expression Viewer (FireBrowse)NDUFB11 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)54539
GTEX Portal (Tissue expression)NDUFB11
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9NX14   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9NX14  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9NX14
Splice isoforms : SwissVarQ9NX14
PhosPhoSitePlusQ9NX14
Domains : Interpro (EBI)NADH_UbQ_OxRdtase_ESSS_su   
Domain families : Pfam (Sanger)ESSS (PF10183)   
Domain families : Pfam (NCBI)pfam10183   
Conserved Domain (NCBI)NDUFB11
DMDM Disease mutations54539
Blocks (Seattle)NDUFB11
SuperfamilyQ9NX14
Human Protein AtlasENSG00000147123
Peptide AtlasQ9NX14
HPRD02323
IPIIPI01014044   IPI00478450   IPI00472058   
Protein Interaction databases
DIP (DOE-UCLA)Q9NX14
IntAct (EBI)Q9NX14
FunCoupENSG00000147123
BioGRIDNDUFB11
STRING (EMBL)NDUFB11
ZODIACNDUFB11
Ontologies - Pathways
QuickGOQ9NX14
Ontology : AmiGOprotein binding  mitochondrial inner membrane  mitochondrial respiratory chain complex I  mitochondrial electron transport, NADH to ubiquinone  integral component of membrane  mitochondrial respiratory chain complex I assembly  
Ontology : EGO-EBIprotein binding  mitochondrial inner membrane  mitochondrial respiratory chain complex I  mitochondrial electron transport, NADH to ubiquinone  integral component of membrane  mitochondrial respiratory chain complex I assembly  
Pathways : KEGGOxidative phosphorylation    Non-alcoholic fatty liver disease (NAFLD)    Alzheimer's disease    Parkinson's disease    Huntington's disease   
NDEx NetworkNDUFB11
Atlas of Cancer Signalling NetworkNDUFB11
Wikipedia pathwaysNDUFB11
Orthology - Evolution
OrthoDB54539
GeneTree (enSembl)ENSG00000147123
Phylogenetic Trees/Animal Genes : TreeFamNDUFB11
HOVERGENQ9NX14
HOGENOMQ9NX14
Homologs : HomoloGeneNDUFB11
Homology/Alignments : Family Browser (UCSC)NDUFB11
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerNDUFB11 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)NDUFB11
dbVarNDUFB11
ClinVarNDUFB11
1000_GenomesNDUFB11 
Exome Variant ServerNDUFB11
ExAC (Exome Aggregation Consortium)NDUFB11 (select the gene name)
Genetic variants : HAPMAP54539
Genomic Variants (DGV)NDUFB11 [DGVbeta]
DECIPHERNDUFB11 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisNDUFB11 
Mutations
ICGC Data PortalNDUFB11 
TCGA Data PortalNDUFB11 
Broad Tumor PortalNDUFB11
OASIS PortalNDUFB11 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICNDUFB11  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDNDUFB11
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
LOVD (Leiden Open Variation Database)MSeqDR-LSDB Mitochondrial Disease Locus Specific Database
BioMutasearch NDUFB11
DgiDB (Drug Gene Interaction Database)NDUFB11
DoCM (Curated mutations)NDUFB11 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)NDUFB11 (select a term)
intoGenNDUFB11
Cancer3DNDUFB11(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM300403    300952   
Orphanet2359   
MedgenNDUFB11
Genetic Testing Registry NDUFB11
NextProtQ9NX14 [Medical]
TSGene54539
GENETestsNDUFB11
Target ValidationNDUFB11
Huge Navigator NDUFB11 [HugePedia]
snp3D : Map Gene to Disease54539
BioCentury BCIQNDUFB11
ClinGenNDUFB11
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD54539
Chemical/Pharm GKB GenePA134924203
Clinical trialNDUFB11
Miscellaneous
canSAR (ICR)NDUFB11 (select the gene name)
Probes
Litterature
PubMed21 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineNDUFB11
EVEXNDUFB11
GoPubMedNDUFB11
iHOPNDUFB11
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed May 31 15:32:28 CEST 2017

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