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NDUFB7 (NADH:ubiquinone oxidoreductase subunit B7)

Identity

Alias_namesNADH dehydrogenase (ubiquinone) 1 beta subcomplex, 7 (18kD, B18)
NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 7, 18kDa
Alias_symbol (synonym)B18
CI-B18
MGC2480
Other alias
HGNC (Hugo) NDUFB7
LocusID (NCBI) 4713
Atlas_Id 70778
Location 19p13.12  [Link to chromosome band 19p13]
Location_base_pair Starts at 14566078 and ends at 14572077 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
GDI2 (10p15.1) / NDUFB7 (19p13.12)NDUFB7 (19p13.12) / ALDH1B1 (9p13.2)PIK3R1 (5q13.1) / NDUFB7 (19p13.12)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)NDUFB7   7702
Cards
Entrez_Gene (NCBI)NDUFB7  4713  NADH:ubiquinone oxidoreductase subunit B7
AliasesB18; CI-B18
GeneCards (Weizmann)NDUFB7
Ensembl hg19 (Hinxton)ENSG00000099795 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000099795 [Gene_View]  chr19:14566078-14572077 [Contig_View]  NDUFB7 [Vega]
ICGC DataPortalENSG00000099795
TCGA cBioPortalNDUFB7
AceView (NCBI)NDUFB7
Genatlas (Paris)NDUFB7
WikiGenes4713
SOURCE (Princeton)NDUFB7
Genetics Home Reference (NIH)NDUFB7
Genomic and cartography
GoldenPath hg38 (UCSC)NDUFB7  -     chr19:14566078-14572077 -  19p13.12   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)NDUFB7  -     19p13.12   [Description]    (hg19-Feb_2009)
EnsemblNDUFB7 - 19p13.12 [CytoView hg19]  NDUFB7 - 19p13.12 [CytoView hg38]
Mapping of homologs : NCBINDUFB7 [Mapview hg19]  NDUFB7 [Mapview hg38]
OMIM603842   
Gene and transcription
Genbank (Entrez)AF112200 AF217091 BC002595 BU565399 CB124371
RefSeq transcript (Entrez)NM_004146
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)NDUFB7
Cluster EST : UnigeneHs.532853 [ NCBI ]
CGAP (NCI)Hs.532853
Alternative Splicing GalleryENSG00000099795
Gene ExpressionNDUFB7 [ NCBI-GEO ]   NDUFB7 [ EBI - ARRAY_EXPRESS ]   NDUFB7 [ SEEK ]   NDUFB7 [ MEM ]
Gene Expression Viewer (FireBrowse)NDUFB7 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)4713
GTEX Portal (Tissue expression)NDUFB7
Protein : pattern, domain, 3D structure
UniProt/SwissProtP17568   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtP17568  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProP17568
Splice isoforms : SwissVarP17568
PhosPhoSitePlusP17568
Domaine pattern : Prosite (Expaxy)CHCH (PS51808)   
Domains : Interpro (EBI)NADH_UbQ_OxRdtase_B18_su   
Domain families : Pfam (Sanger)NDUF_B7 (PF05676)   
Domain families : Pfam (NCBI)pfam05676   
Conserved Domain (NCBI)NDUFB7
DMDM Disease mutations4713
Blocks (Seattle)NDUFB7
SuperfamilyP17568
Human Protein AtlasENSG00000099795
Peptide AtlasP17568
HPRD11957
IPIIPI00219772   
Protein Interaction databases
DIP (DOE-UCLA)P17568
IntAct (EBI)P17568
FunCoupENSG00000099795
BioGRIDNDUFB7
STRING (EMBL)NDUFB7
ZODIACNDUFB7
Ontologies - Pathways
QuickGOP17568
Ontology : AmiGOmitochondrion  mitochondrial inner membrane  mitochondrial respiratory chain complex I  mitochondrial intermembrane space  mitochondrial electron transport, NADH to ubiquinone  mitochondrial electron transport, NADH to ubiquinone  NADH dehydrogenase (ubiquinone) activity  mitochondrial respiratory chain complex I assembly  
Ontology : EGO-EBImitochondrion  mitochondrial inner membrane  mitochondrial respiratory chain complex I  mitochondrial intermembrane space  mitochondrial electron transport, NADH to ubiquinone  mitochondrial electron transport, NADH to ubiquinone  NADH dehydrogenase (ubiquinone) activity  mitochondrial respiratory chain complex I assembly  
Pathways : KEGGOxidative phosphorylation    Non-alcoholic fatty liver disease (NAFLD)    Alzheimer's disease    Parkinson's disease    Huntington's disease   
NDEx NetworkNDUFB7
Atlas of Cancer Signalling NetworkNDUFB7
Wikipedia pathwaysNDUFB7
Orthology - Evolution
OrthoDB4713
GeneTree (enSembl)ENSG00000099795
Phylogenetic Trees/Animal Genes : TreeFamNDUFB7
HOVERGENP17568
HOGENOMP17568
Homologs : HomoloGeneNDUFB7
Homology/Alignments : Family Browser (UCSC)NDUFB7
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerNDUFB7 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)NDUFB7
dbVarNDUFB7
ClinVarNDUFB7
1000_GenomesNDUFB7 
Exome Variant ServerNDUFB7
ExAC (Exome Aggregation Consortium)NDUFB7 (select the gene name)
Genetic variants : HAPMAP4713
Genomic Variants (DGV)NDUFB7 [DGVbeta]
DECIPHERNDUFB7 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisNDUFB7 
Mutations
ICGC Data PortalNDUFB7 
TCGA Data PortalNDUFB7 
Broad Tumor PortalNDUFB7
OASIS PortalNDUFB7 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICNDUFB7  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDNDUFB7
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
LOVD (Leiden Open Variation Database)MSeqDR-LSDB Mitochondrial Disease Locus Specific Database
BioMutasearch NDUFB7
DgiDB (Drug Gene Interaction Database)NDUFB7
DoCM (Curated mutations)NDUFB7 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)NDUFB7 (select a term)
intoGenNDUFB7
Cancer3DNDUFB7(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM603842   
Orphanet
MedgenNDUFB7
Genetic Testing Registry NDUFB7
NextProtP17568 [Medical]
TSGene4713
GENETestsNDUFB7
Target ValidationNDUFB7
Huge Navigator NDUFB7 [HugePedia]
snp3D : Map Gene to Disease4713
BioCentury BCIQNDUFB7
ClinGenNDUFB7
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD4713
Chemical/Pharm GKB GenePA31513
Clinical trialNDUFB7
Miscellaneous
canSAR (ICR)NDUFB7 (select the gene name)
Probes
Litterature
PubMed25 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineNDUFB7
EVEXNDUFB7
GoPubMedNDUFB7
iHOPNDUFB7
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed May 31 15:32:29 CEST 2017

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