Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumours   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

NDUFB8 (NADH:ubiquinone oxidoreductase subunit B8)

Identity

Alias_namesNADH dehydrogenase (ubiquinone) 1 beta subcomplex, 8 (19kD, ASHI)
NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 8, 19kDa
Alias_symbol (synonym)ASHI
CI-ASHI
Other alias
HGNC (Hugo) NDUFB8
LocusID (NCBI) 4714
Atlas_Id 49909
Location 10q24.31  [Link to chromosome band 10q24]
Location_base_pair Starts at 102283486 and ends at 102289680 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)NDUFB8   7703
Cards
Entrez_Gene (NCBI)NDUFB8  4714  NADH:ubiquinone oxidoreductase subunit B8
AliasesASHI; CI-ASHI
GeneCards (Weizmann)NDUFB8
Ensembl hg19 (Hinxton)ENSG00000166136 [Gene_View]  chr10:102283486-102289680 [Contig_View]  NDUFB8 [Vega]
Ensembl hg38 (Hinxton)ENSG00000166136 [Gene_View]  chr10:102283486-102289680 [Contig_View]  NDUFB8 [Vega]
ICGC DataPortalENSG00000166136
TCGA cBioPortalNDUFB8
AceView (NCBI)NDUFB8
Genatlas (Paris)NDUFB8
WikiGenes4714
SOURCE (Princeton)NDUFB8
Genetics Home Reference (NIH)NDUFB8
Genomic and cartography
GoldenPath hg19 (UCSC)NDUFB8  -     chr10:102283486-102289680 -  10q24.31   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)NDUFB8  -     10q24.31   [Description]    (hg38-Dec_2013)
EnsemblNDUFB8 - 10q24.31 [CytoView hg19]  NDUFB8 - 10q24.31 [CytoView hg38]
Mapping of homologs : NCBINDUFB8 [Mapview hg19]  NDUFB8 [Mapview hg38]
OMIM602140   
Gene and transcription
Genbank (Entrez)AA782554 AF044958 AF077028 AF115968 AI282606
RefSeq transcript (Entrez)NM_001284367 NM_001284368 NM_005004
RefSeq genomic (Entrez)NC_000010 NC_018921 NT_030059 NW_004929376
Consensus coding sequences : CCDS (NCBI)NDUFB8
Cluster EST : UnigeneHs.523215 [ NCBI ]
CGAP (NCI)Hs.523215
Alternative Splicing GalleryENSG00000166136
Gene ExpressionNDUFB8 [ NCBI-GEO ]   NDUFB8 [ EBI - ARRAY_EXPRESS ]   NDUFB8 [ SEEK ]   NDUFB8 [ MEM ]
Gene Expression Viewer (FireBrowse)NDUFB8 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)4714
GTEX Portal (Tissue expression)NDUFB8
Protein : pattern, domain, 3D structure
UniProt/SwissProtO95169   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtO95169  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProO95169
Splice isoforms : SwissVarO95169
PhosPhoSitePlusO95169
Domains : Interpro (EBI)NDUFB8    Ndufb8_metazoa   
Domain families : Pfam (Sanger)NDUF_B8 (PF05821)   
Domain families : Pfam (NCBI)pfam05821   
Conserved Domain (NCBI)NDUFB8
DMDM Disease mutations4714
Blocks (Seattle)NDUFB8
SuperfamilyO95169
Human Protein AtlasENSG00000166136
Peptide AtlasO95169
HPRD11886
IPIIPI00028883   IPI00479154   IPI00642807   IPI00976412   
Protein Interaction databases
DIP (DOE-UCLA)O95169
IntAct (EBI)O95169
FunCoupENSG00000166136
BioGRIDNDUFB8
STRING (EMBL)NDUFB8
ZODIACNDUFB8
Ontologies - Pathways
QuickGOO95169
Ontology : AmiGOmitochondrial inner membrane  mitochondrial respiratory chain complex I  mitochondrial respiratory chain complex I  endoplasmic reticulum  mitochondrial electron transport, NADH to ubiquinone  mitochondrial electron transport, NADH to ubiquinone  NADH dehydrogenase (ubiquinone) activity  integral component of membrane  mitochondrial respiratory chain complex I assembly  
Ontology : EGO-EBImitochondrial inner membrane  mitochondrial respiratory chain complex I  mitochondrial respiratory chain complex I  endoplasmic reticulum  mitochondrial electron transport, NADH to ubiquinone  mitochondrial electron transport, NADH to ubiquinone  NADH dehydrogenase (ubiquinone) activity  integral component of membrane  mitochondrial respiratory chain complex I assembly  
Pathways : KEGGOxidative phosphorylation    Non-alcoholic fatty liver disease (NAFLD)    Alzheimer's disease    Parkinson's disease    Huntington's disease   
NDEx NetworkNDUFB8
Atlas of Cancer Signalling NetworkNDUFB8
Wikipedia pathwaysNDUFB8
Orthology - Evolution
OrthoDB4714
GeneTree (enSembl)ENSG00000166136
Phylogenetic Trees/Animal Genes : TreeFamNDUFB8
HOVERGENO95169
HOGENOMO95169
Homologs : HomoloGeneNDUFB8
Homology/Alignments : Family Browser (UCSC)NDUFB8
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerNDUFB8 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)NDUFB8
dbVarNDUFB8
ClinVarNDUFB8
1000_GenomesNDUFB8 
Exome Variant ServerNDUFB8
ExAC (Exome Aggregation Consortium)NDUFB8 (select the gene name)
Genetic variants : HAPMAP4714
Genomic Variants (DGV)NDUFB8 [DGVbeta]
DECIPHER (Syndromes)10:102283486-102289680  ENSG00000166136
CONAN: Copy Number AnalysisNDUFB8 
Mutations
ICGC Data PortalNDUFB8 
TCGA Data PortalNDUFB8 
Broad Tumor PortalNDUFB8
OASIS PortalNDUFB8 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICNDUFB8  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDNDUFB8
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
LOVD (Leiden Open Variation Database)MSeqDR-LSDB Mitochondrial Disease Locus Specific Database
BioMutasearch NDUFB8
DgiDB (Drug Gene Interaction Database)NDUFB8
DoCM (Curated mutations)NDUFB8 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)NDUFB8 (select a term)
intoGenNDUFB8
Cancer3DNDUFB8(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM602140   
Orphanet
MedgenNDUFB8
Genetic Testing Registry NDUFB8
NextProtO95169 [Medical]
TSGene4714
GENETestsNDUFB8
Huge Navigator NDUFB8 [HugePedia]
snp3D : Map Gene to Disease4714
BioCentury BCIQNDUFB8
ClinGenNDUFB8
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD4714
Chemical/Pharm GKB GenePA31514
Clinical trialNDUFB8
Miscellaneous
canSAR (ICR)NDUFB8 (select the gene name)
Probes
Litterature
PubMed31 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineNDUFB8
EVEXNDUFB8
GoPubMedNDUFB8
iHOPNDUFB8
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Mar 14 13:18:30 CET 2017

Home   Genes   Leukemias   Solid Tumours   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.