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NDUFS7 (NADH:ubiquinone oxidoreductase core subunit S7)

Identity

Alias_namesNADH dehydrogenase (ubiquinone) Fe-S protein 7 (20kD) (NADH-coenzyme Q reductase)
NADH dehydrogenase (ubiquinone) Fe-S protein 7, 20kDa (NADH-coenzyme Q reductase)
Alias_symbol (synonym)PSST
FLJ46880
FLJ45860
CI-20
Other aliasCI-20KD
MY017
HGNC (Hugo) NDUFS7
LocusID (NCBI) 374291
Atlas_Id 70785
Location 19p13.3  [Link to chromosome band 19p13]
Location_base_pair Starts at 1383884 and ends at 1395589 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
C19orf25 (19p13.3) / NDUFS7 (19p13.3)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)NDUFS7   7714
Cards
Entrez_Gene (NCBI)NDUFS7  374291  NADH:ubiquinone oxidoreductase core subunit S7
AliasesCI-20; CI-20KD; MY017; PSST
GeneCards (Weizmann)NDUFS7
Ensembl hg19 (Hinxton)ENSG00000115286 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000115286 [Gene_View]  chr19:1383884-1395589 [Contig_View]  NDUFS7 [Vega]
ICGC DataPortalENSG00000115286
TCGA cBioPortalNDUFS7
AceView (NCBI)NDUFS7
Genatlas (Paris)NDUFS7
WikiGenes374291
SOURCE (Princeton)NDUFS7
Genetics Home Reference (NIH)NDUFS7
Genomic and cartography
GoldenPath hg38 (UCSC)NDUFS7  -     chr19:1383884-1395589 +  19p13.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)NDUFS7  -     19p13.3   [Description]    (hg19-Feb_2009)
EnsemblNDUFS7 - 19p13.3 [CytoView hg19]  NDUFS7 - 19p13.3 [CytoView hg38]
Mapping of homologs : NCBINDUFS7 [Mapview hg19]  NDUFS7 [Mapview hg38]
OMIM256000   601825   
Gene and transcription
Genbank (Entrez)AF060512 AF115969 AK056061 AK091024 AK091046
RefSeq transcript (Entrez)NM_024407
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)NDUFS7
Cluster EST : UnigeneHs.211914 [ NCBI ]
CGAP (NCI)Hs.211914
Alternative Splicing GalleryENSG00000115286
Gene ExpressionNDUFS7 [ NCBI-GEO ]   NDUFS7 [ EBI - ARRAY_EXPRESS ]   NDUFS7 [ SEEK ]   NDUFS7 [ MEM ]
Gene Expression Viewer (FireBrowse)NDUFS7 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)374291
GTEX Portal (Tissue expression)NDUFS7
Protein : pattern, domain, 3D structure
UniProt/SwissProtO75251   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtO75251  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProO75251
Splice isoforms : SwissVarO75251
Catalytic activity : Enzyme1.6.5.3 [ Enzyme-Expasy ]   1.6.5.31.6.5.3 [ IntEnz-EBI ]   1.6.5.3 [ BRENDA ]   1.6.5.3 [ KEGG ]   
PhosPhoSitePlusO75251
Domaine pattern : Prosite (Expaxy)COMPLEX1_20K (PS01150)   
Domains : Interpro (EBI)NADH_UbQ_OxRdtase-like_20kDa    NADH_UQ_OxRdtase_20Kd_su   
Domain families : Pfam (Sanger)Oxidored_q6 (PF01058)   
Domain families : Pfam (NCBI)pfam01058   
Conserved Domain (NCBI)NDUFS7
DMDM Disease mutations374291
Blocks (Seattle)NDUFS7
SuperfamilyO75251
Human Protein AtlasENSG00000115286
Peptide AtlasO75251
HPRD03491
IPIIPI01009519   IPI00922625   IPI00385965   IPI00443537   IPI00444090   IPI01018973   IPI00940795   IPI01011904   IPI01010655   IPI00419604   IPI01014634   IPI01015072   IPI01015517   
Protein Interaction databases
DIP (DOE-UCLA)O75251
IntAct (EBI)O75251
FunCoupENSG00000115286
BioGRIDNDUFS7
STRING (EMBL)NDUFS7
ZODIACNDUFS7
Ontologies - Pathways
QuickGOO75251
Ontology : AmiGOprotease binding  NADH dehydrogenase activity  protein binding  mitochondrial respiratory chain complex I  mitochondrial respiratory chain complex I  mitochondrial respiratory chain complex I  mitochondrial matrix  mitochondrial electron transport, NADH to ubiquinone  mitochondrial electron transport, NADH to ubiquinone  NADH dehydrogenase (ubiquinone) activity  oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor  mitochondrial respiratory chain complex I assembly  mitochondrial respiratory chain complex I assembly  neuron projection  neuronal cell body  metal ion binding  quinone binding  4 iron, 4 sulfur cluster binding  synaptic membrane  
Ontology : EGO-EBIprotease binding  NADH dehydrogenase activity  protein binding  mitochondrial respiratory chain complex I  mitochondrial respiratory chain complex I  mitochondrial respiratory chain complex I  mitochondrial matrix  mitochondrial electron transport, NADH to ubiquinone  mitochondrial electron transport, NADH to ubiquinone  NADH dehydrogenase (ubiquinone) activity  oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor  mitochondrial respiratory chain complex I assembly  mitochondrial respiratory chain complex I assembly  neuron projection  neuronal cell body  metal ion binding  quinone binding  4 iron, 4 sulfur cluster binding  synaptic membrane  
Pathways : KEGGOxidative phosphorylation    Non-alcoholic fatty liver disease (NAFLD)    Alzheimer's disease    Parkinson's disease    Huntington's disease   
NDEx NetworkNDUFS7
Atlas of Cancer Signalling NetworkNDUFS7
Wikipedia pathwaysNDUFS7
Orthology - Evolution
OrthoDB374291
GeneTree (enSembl)ENSG00000115286
Phylogenetic Trees/Animal Genes : TreeFamNDUFS7
HOVERGENO75251
HOGENOMO75251
Homologs : HomoloGeneNDUFS7
Homology/Alignments : Family Browser (UCSC)NDUFS7
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerNDUFS7 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)NDUFS7
dbVarNDUFS7
ClinVarNDUFS7
1000_GenomesNDUFS7 
Exome Variant ServerNDUFS7
ExAC (Exome Aggregation Consortium)NDUFS7 (select the gene name)
Genetic variants : HAPMAP374291
Genomic Variants (DGV)NDUFS7 [DGVbeta]
DECIPHERNDUFS7 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisNDUFS7 
Mutations
ICGC Data PortalNDUFS7 
TCGA Data PortalNDUFS7 
Broad Tumor PortalNDUFS7
OASIS PortalNDUFS7 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICNDUFS7  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDNDUFS7
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
LOVD (Leiden Open Variation Database)MSeqDR-LSDB Mitochondrial Disease Locus Specific Database
BioMutasearch NDUFS7
DgiDB (Drug Gene Interaction Database)NDUFS7
DoCM (Curated mutations)NDUFS7 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)NDUFS7 (select a term)
intoGenNDUFS7
Cancer3DNDUFS7(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM256000    601825   
Orphanet369    19814   
MedgenNDUFS7
Genetic Testing Registry NDUFS7
NextProtO75251 [Medical]
TSGene374291
GENETestsNDUFS7
Target ValidationNDUFS7
Huge Navigator NDUFS7 [HugePedia]
snp3D : Map Gene to Disease374291
BioCentury BCIQNDUFS7
ClinGenNDUFS7
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD374291
Chemical/Pharm GKB GenePA31524
Clinical trialNDUFS7
Miscellaneous
canSAR (ICR)NDUFS7 (select the gene name)
Probes
Litterature
PubMed35 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineNDUFS7
EVEXNDUFS7
GoPubMedNDUFS7
iHOPNDUFS7
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:31:55 CEST 2017

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