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NECTIN3-AS1 (NECTIN3 antisense RNA 1)

Identity

Alias_namesPVRL3-AS1
PVRL3 antisense RNA 1 (non-protein coding)
PVRL3 antisense RNA 1
Other alias
HGNC (Hugo) NECTIN3-AS1
LocusID (NCBI) 100506555
Atlas_Id 79507
Location 3q13.13  [Link to chromosome band 3q13]
Location_base_pair Starts at 111045316 and ends at 111069959 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)NECTIN3-AS1   40813
Cards
Entrez_Gene (NCBI)NECTIN3-AS1  100506555  NECTIN3 antisense RNA 1
AliasesPVRL3-AS1
GeneCards (Weizmann)NECTIN3-AS1
Ensembl hg19 (Hinxton)ENSG00000242242 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000242242 [Gene_View]  ENSG00000242242 [Sequence]  chr3:111045316-111069959 [Contig_View]  NECTIN3-AS1 [Vega]
ICGC DataPortalENSG00000242242
TCGA cBioPortalNECTIN3-AS1
AceView (NCBI)NECTIN3-AS1
Genatlas (Paris)NECTIN3-AS1
WikiGenes100506555
SOURCE (Princeton)NECTIN3-AS1
Genetics Home Reference (NIH)NECTIN3-AS1
Genomic and cartography
GoldenPath hg38 (UCSC)NECTIN3-AS1  -     chr3:111045316-111069959 -  3q13.13   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)NECTIN3-AS1  -     3q13.13   [Description]    (hg19-Feb_2009)
EnsemblNECTIN3-AS1 - 3q13.13 [CytoView hg19]  NECTIN3-AS1 - 3q13.13 [CytoView hg38]
Mapping of homologs : NCBINECTIN3-AS1 [Mapview hg19]  NECTIN3-AS1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BM678464 BU852869
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)NECTIN3-AS1
Cluster EST : UnigeneHs.535689 [ NCBI ]
CGAP (NCI)Hs.535689
Alternative Splicing GalleryENSG00000242242
Gene ExpressionNECTIN3-AS1 [ NCBI-GEO ]   NECTIN3-AS1 [ EBI - ARRAY_EXPRESS ]   NECTIN3-AS1 [ SEEK ]   NECTIN3-AS1 [ MEM ]
Gene Expression Viewer (FireBrowse)NECTIN3-AS1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100506555
GTEX Portal (Tissue expression)NECTIN3-AS1
Human Protein AtlasENSG00000242242-NECTIN3-AS1 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)NECTIN3-AS1
DMDM Disease mutations100506555
Blocks (Seattle)NECTIN3-AS1
Human Protein Atlas [tissue]ENSG00000242242-NECTIN3-AS1 [tissue]
Protein Interaction databases
FunCoupENSG00000242242
BioGRIDNECTIN3-AS1
STRING (EMBL)NECTIN3-AS1
ZODIACNECTIN3-AS1
Ontologies - Pathways
Huge Navigator NECTIN3-AS1 [HugePedia]
snp3D : Map Gene to Disease100506555
BioCentury BCIQNECTIN3-AS1
ClinGenNECTIN3-AS1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100506555
Clinical trialNECTIN3-AS1
Miscellaneous
canSAR (ICR)NECTIN3-AS1 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineNECTIN3-AS1
EVEXNECTIN3-AS1
GoPubMedNECTIN3-AS1
iHOPNECTIN3-AS1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Jul 30 14:19:44 CEST 2018

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