Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

NEDD4L (NEDD4 like E3 ubiquitin protein ligase)

Identity

Alias (NCBI)NEDD4-2
NEDD4.2
PVNH7
RSP5
hNEDD4-2
HGNC (Hugo) NEDD4L
HGNC Alias symbKIAA0439
RSP5
NEDD4-2
HGNC Previous nameneural precursor cell expressed, developmentally down-regulated 4-like
 neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase
LocusID (NCBI) 23327
Atlas_Id 46861
Location 18q21.31  [Link to chromosome band 18q21]
Location_base_pair Starts at 58044226 and ends at 58401539 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
ATXN1 (6p22.3) / NEDD4L (18q21.31)CDC42BPB (14q32.32) / NEDD4L (18q21.31)CHI3L1 (1q32.1) / NEDD4L (18q21.31)
CYP4B1 (1p33) / NEDD4L (18q21.31)HAUS1 (18q21.1) / NEDD4L (18q21.31)LUZP1 (1p36.12) / NEDD4L (18q21.31)
MALAT1 (11q13.1) / NEDD4L (18q21.31)NEDD4L (18q21.31) / BCL2 (18q21.33)NEDD4L (18q21.31) / CDH19 (18q22.1)
NEDD4L (18q21.31) / HYI (1p34.2)NEDD4L (18q21.31) / IL1R1 (2q12.1)NEDD4L (18q21.31) / IMMP2L (7q31.1)
NEDD4L (18q21.31) / MORC3 (21q22.12)NEDD4L (18q21.31) / NEDD4L (18q21.31)NEDD4L (18q21.31) / PIP5K1A (1q21.3)
NEDD4L (18q21.31) / TLN2 (15q22.2)NEDD4L (18q21.31) / ZNF396 (18q12.2)SECISBP2 (9q22.2) / NEDD4L (18q21.31)
STX16 (20q13.32) / NEDD4L (18q21.31)LUZP1 1p36.12 / NEDD4L 18q21.31NEDD4L 18q21.31 / BCL2 18q21.33
NEDD4L 18q21.31 / CDH19 18q22.1NEDD4L 18q21.31 / HYI 1p34.2NEDD4L 18q21.31 / IMMP2L 7q31.1
NEDD4L 18q21.31 / MORC3 21q22.12NEDD4L 18q21.31 / TLN2 15q22.2NEDD4L 18q21.31 / ZNF396 18q12.2
SECISBP2 9q22.2 / NEDD4L 18q21.31

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

Nomenclature
HGNC (Hugo)NEDD4L   7728
Cards
Entrez_Gene (NCBI)NEDD4L    NEDD4 like E3 ubiquitin protein ligase
AliasesNEDD4-2; NEDD4.2; PVNH7; RSP5; 
hNEDD4-2
GeneCards (Weizmann)NEDD4L
Ensembl hg19 (Hinxton)ENSG00000049759 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000049759 [Gene_View]  ENSG00000049759 [Sequence]  chr18:58044226-58401539 [Contig_View]  NEDD4L [Vega]
ICGC DataPortalENSG00000049759
TCGA cBioPortalNEDD4L
AceView (NCBI)NEDD4L
Genatlas (Paris)NEDD4L
SOURCE (Princeton)NEDD4L
Genetics Home Reference (NIH)NEDD4L
Genomic and cartography
GoldenPath hg38 (UCSC)NEDD4L  -     chr18:58044226-58401539 +  18q21.31   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)NEDD4L  -     18q21.31   [Description]    (hg19-Feb_2009)
GoldenPathNEDD4L - 18q21.31 [CytoView hg19]  NEDD4L - 18q21.31 [CytoView hg38]
ImmunoBaseENSG00000049759
Genome Data Viewer NCBINEDD4L [Mapview hg19]  
OMIM606384   617201   
Gene and transcription
Genbank (Entrez)AB007899 AB071179 AF070601 AF210730 AF385931
RefSeq transcript (Entrez)NM_001144964 NM_001144965 NM_001144966 NM_001144967 NM_001144968 NM_001144969 NM_001144970 NM_001144971 NM_001243960 NM_015277
Consensus coding sequences : CCDS (NCBI)NEDD4L
Gene ExpressionNEDD4L [ NCBI-GEO ]   NEDD4L [ EBI - ARRAY_EXPRESS ]   NEDD4L [ SEEK ]   NEDD4L [ MEM ]
Gene Expression Viewer (FireBrowse)NEDD4L [ Firebrowse - Broad ]
GenevisibleExpression of NEDD4L in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)23327
GTEX Portal (Tissue expression)NEDD4L
Human Protein AtlasENSG00000049759-NEDD4L [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)NEDD4L
Human Protein Atlas [tissue]ENSG00000049759-NEDD4L [tissue]
HPRD05903
Protein Interaction databases
BioGRIDNEDD4L
STRING (EMBL)NEDD4L
ZODIACNEDD4L
Ontologies - Pathways
Litterature
PubMed278 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXNEDD4L
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Oct 4 15:22:28 CEST 2021

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.