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NEGR1-IT1 (NEGR1 intronic transcript 1)

Identity

Alias_namesNEGR1 intronic transcript 1 (non-protein coding)
Other alias-
HGNC (Hugo) NEGR1-IT1
LocusID (NCBI) 100852409
Atlas_Id 70798
Location 1p31.1  [Link to chromosome band 1p31]
Location_base_pair Starts at 71794232 and ends at 71837012 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)NEGR1-IT1   41432
Cards
Entrez_Gene (NCBI)NEGR1-IT1  100852409  NEGR1 intronic transcript 1
Aliases
GeneCards (Weizmann)NEGR1-IT1
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr1:71794232-71837012 [Contig_View]  NEGR1-IT1 [Vega]
TCGA cBioPortalNEGR1-IT1
AceView (NCBI)NEGR1-IT1
Genatlas (Paris)NEGR1-IT1
WikiGenes100852409
SOURCE (Princeton)NEGR1-IT1
Genetics Home Reference (NIH)NEGR1-IT1
Genomic and cartography
GoldenPath hg38 (UCSC)NEGR1-IT1  -     chr1:71794232-71837012 -  1p31.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)NEGR1-IT1  -     1p31.1   [Description]    (hg19-Feb_2009)
EnsemblNEGR1-IT1 - 1p31.1 [CytoView hg19]  NEGR1-IT1 - 1p31.1 [CytoView hg38]
Mapping of homologs : NCBINEGR1-IT1 [Mapview hg19]  NEGR1-IT1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC042082
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)NEGR1-IT1
Cluster EST : UnigeneHs.681780 [ NCBI ]
CGAP (NCI)Hs.681780
Gene ExpressionNEGR1-IT1 [ NCBI-GEO ]   NEGR1-IT1 [ EBI - ARRAY_EXPRESS ]   NEGR1-IT1 [ SEEK ]   NEGR1-IT1 [ MEM ]
Gene Expression Viewer (FireBrowse)NEGR1-IT1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100852409
GTEX Portal (Tissue expression)NEGR1-IT1
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)NEGR1-IT1
DMDM Disease mutations100852409
Blocks (Seattle)NEGR1-IT1
Protein Interaction databases
BioGRIDNEGR1-IT1
STRING (EMBL)NEGR1-IT1
ZODIACNEGR1-IT1
Ontologies - Pathways
Huge Navigator NEGR1-IT1 [HugePedia]
snp3D : Map Gene to Disease100852409
BioCentury BCIQNEGR1-IT1
ClinGenNEGR1-IT1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100852409
Clinical trialNEGR1-IT1
Miscellaneous
canSAR (ICR)NEGR1-IT1 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineNEGR1-IT1
EVEXNEGR1-IT1
GoPubMedNEGR1-IT1
iHOPNEGR1-IT1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

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indexed on : Mon Sep 18 13:31:57 CEST 2017

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