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NEK10 (NIMA-related kinase 10)

Identity

Other names-
HGNC (Hugo) NEK10
LocusID (NCBI) 152110
Location 3p24.1
Location_base_pair Starts at 27257097 and ends at 27410912 bp from pter ( according to hg19-Feb_2009)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 

External links

Nomenclature
HGNC (Hugo)NEK10   18592
Entrez_Gene (NCBI)NEK10  152110  NIMA-related kinase 10
Cards
GeneCards (Weizmann)NEK10
Ensembl (Hinxton)ENSG00000163491 [Gene_View]  chr3:27257097-27410912 [Contig_View]  NEK10 [Vega]
AceView (NCBI)NEK10
Genatlas (Paris)NEK10
SOURCE (Stanford)NM_001031741 NM_152534 NM_199347
Genomic and cartography
GoldenPath (UCSC)NEK10  -  3p24.1   chr3:27257097-27410912 -  3p24.1   [Description]    (hg19-Feb_2009)
EnsemblNEK10 - 3p24.1 [CytoView]
Mapping of homologs : NCBINEK10 [Mapview]
Gene and transcription
Genbank (Entrez)AK057247 AK098832 AK123061 AK128585 BC045758
RefSeq transcript (SRS)NM_001031741 NM_152534 NM_199347
RefSeq transcript (Entrez)NM_001031741 NM_152534 NM_199347
RefSeq genomic (SRS)AC_000135 NC_000003 NC_018914 NT_022517 NW_001838877 NW_004078011
RefSeq genomic (Entrez)AC_000135 NC_000003 NC_018914 NT_022517 NW_001838877 NW_004078011
Consensus coding sequences : CCDS (NCBI)NEK10
Cluster EST : UnigeneHs.743887 [ SRS ] Hs.743887 [ NCBI ]
CGAP (NCI)Hs.743887
Alternative Splicing : Fast-db (Paris)GSHG0021585
Alternative Splicing GalleryENSG00000163491
Gene ExpressionNEK10 [ NCBI-GEO ]   NEK10 [ EBI - ARRAY_EXPRESS ]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ6ZWH5 (SRS) Q6ZWH5 (Uniprot)
NextProtQ6ZWH5
With graphics : InterProQ6ZWH5
Splice isoforms : SwissVarQ6ZWH5(Swissvar)
Domaine pattern : Prosite (SRS)ARM_REPEAT (PS50176)    PROTEIN_KINASE_ATP (PS00107)    PROTEIN_KINASE_DOM (PS50011)    PROTEIN_KINASE_TYR (PS00109)   
Domaine pattern : Prosite (Expaxy)ARM_REPEAT (PS50176)    PROTEIN_KINASE_ATP (PS00107)    PROTEIN_KINASE_DOM (PS50011)    PROTEIN_KINASE_TYR (PS00109)   
Domains : Interpro (SRS)ARM-like    ARM-type_fold    Kinase-like_dom    Prot_kinase_cat_dom    Protein_kinase_ATP_BS    Ser/Thr_dual-sp_kinase_dom    Tyr_kinase_AS   
Domains : Interpro (EBI)ARM-like    ARM-type_fold    Kinase-like_dom    Prot_kinase_cat_dom    Protein_kinase_ATP_BS    Ser/Thr_dual-sp_kinase_dom    Tyr_kinase_AS   
Related proteins : CluSTrQ6ZWH5
Domain families : Pfam (SRS)Pkinase (PF00069)   
Domain families : Pfam (Sanger)Pkinase (PF00069)   
Domain families : Pfam (NCBI)pfam00069   
Domain families : Smart (EMBL)S_TKc (SM00220)  
DMDM152110
Blocks (Seattle)Q6ZWH5
Human Protein AtlasENSG00000163491
HPRD08135
IPIIPI00065454   IPI00807359   IPI00807338   IPI00419203   IPI00915026   IPI00743191   IPI00646668   IPI00941775   IPI01015790   IPI00927325   IPI00924531   IPI00925173   
Protein Interaction databases
DIP (DOE-UCLA)Q6ZWH5
IntAct (EBI)Q6ZWH5
FunCoupENSG00000163491
REACTOMENEK10
Protein Interaction Database152110
BioGRIDNEK10
InParanoidQ6ZWH5
Interologous Interaction database Q6ZWH5
IntegromeDBNEK10
Polymorphism : SNP, mutations, diseases
SNP Single Nucleotide Polymorphism (NCBI)NEK10
SNP (GeneSNP Utah)NEK10
SNP : HGBaseNEK10
Genetic variants : HAPMAPNEK10
Somatic Mutations in Cancer : COSMICNEK10 
CONAN: Copy Number AnalysisNEK10 
Mutations and Diseases : HGMDNEK10
OMIM
GENETests
Disease Genetic AssociationNEK10
Huge Navigator NEK10 [HugePedia]  NEK10 [HugeCancerGEM]
Genomic VariantsNEK10  NEK10 [DGVbeta]
snp3D : Map Gene to Disease152110
General knowledge
Homologs : HomoloGeneNEK10
Homology/Alignments : Family Browser (UCSC)NEK10
Phylogenetic Trees/Animal Genes : TreeFamNEK10
Catalytic activity : Enzyme2.7.11.1 [ Enzyme-Expasy ]   2.7.11.1 [ Enzyme-SRS ]   2.7.11.1 [ IntEnz-EBI ]   2.7.11.1 [ BRENDA ]   2.7.11.1 [ KEGG ]   
Chemical/Protein Interactions : CTD152110
Chemical/Pharm GKB GenePA38594
Clinical trialNEK10
Cancer Resource (Charite)ENSG00000163491
Ontology : AmiGOprotein serine/threonine kinase activity  protein tyrosine kinase activity  ATP binding  metal ion binding  
Ontology : EGO-EBIprotein serine/threonine kinase activity  protein tyrosine kinase activity  ATP binding  metal ion binding  
Other databases
Probes
Litterature
PubMed11 Pubmed reference(s) in Entrez
PubGeneNEK10
iHOPNEK10
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written09-2002Dessen P, Le Minor S
Updated01-2013Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed May 1 12:40:38 CEST 2013
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