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NEMP1 (nuclear envelope integral membrane protein 1)

Identity

Alias (NCBI)TMEM194
TMEM194A
HGNC (Hugo) NEMP1
HGNC Alias symbKIAA0286
HGNC Previous nameTMEM194
 TMEM194A
HGNC Previous nametransmembrane protein 194
 transmembrane protein 194A
LocusID (NCBI) 23306
Atlas_Id 58190
Location 12q13.3  [Link to chromosome band 12q13]
Location_base_pair Starts at 57055643 and ends at 57078791 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
LRP1 (12q13.3) / NEMP1 (12q13.3)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

 

Nomenclature
HGNC (Hugo)NEMP1   29001
Cards
Entrez_Gene (NCBI)NEMP1    nuclear envelope integral membrane protein 1
AliasesTMEM194; TMEM194A
GeneCards (Weizmann)NEMP1
Ensembl hg19 (Hinxton)ENSG00000166881 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000166881 [Gene_View]  ENSG00000166881 [Sequence]  chr12:57055643-57078791 [Contig_View]  NEMP1 [Vega]
ICGC DataPortalENSG00000166881
TCGA cBioPortalNEMP1
AceView (NCBI)NEMP1
Genatlas (Paris)NEMP1
SOURCE (Princeton)NEMP1
Genetics Home Reference (NIH)NEMP1
Genomic and cartography
GoldenPath hg38 (UCSC)NEMP1  -     chr12:57055643-57078791 -  12q13.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)NEMP1  -     12q13.3   [Description]    (hg19-Feb_2009)
GoldenPathNEMP1 - 12q13.3 [CytoView hg19]  NEMP1 - 12q13.3 [CytoView hg38]
ImmunoBaseENSG00000166881
Genome Data Viewer NCBINEMP1 [Mapview hg19]  
OMIM616496   
Gene and transcription
Genbank (Entrez)AB006624 AK294566 AL833310 AL833311 BC071597
RefSeq transcript (Entrez)NM_001130963 NM_015257
Consensus coding sequences : CCDS (NCBI)NEMP1
Gene ExpressionNEMP1 [ NCBI-GEO ]   NEMP1 [ EBI - ARRAY_EXPRESS ]   NEMP1 [ SEEK ]   NEMP1 [ MEM ]
Gene Expression Viewer (FireBrowse)NEMP1 [ Firebrowse - Broad ]
GenevisibleExpression of NEMP1 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)23306
GTEX Portal (Tissue expression)NEMP1
Human Protein AtlasENSG00000166881-NEMP1 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtO14524   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtO14524  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProO14524
PhosPhoSitePlusO14524
Domains : Interpro (EBI)NEMP_fam   
Domain families : Pfam (Sanger)NEMP (PF10225)   
Domain families : Pfam (NCBI)pfam10225   
Conserved Domain (NCBI)NEMP1
SuperfamilyO14524
AlphaFold pdb e-kbO14524   
Human Protein Atlas [tissue]ENSG00000166881-NEMP1 [tissue]
Protein Interaction databases
DIP (DOE-UCLA)O14524
IntAct (EBI)O14524
BioGRIDNEMP1
STRING (EMBL)NEMP1
ZODIACNEMP1
Ontologies - Pathways
QuickGOO14524
Ontology : AmiGOmolecular_function  nuclear envelope  nuclear envelope  nuclear inner membrane  integral component of membrane  nuclear membrane organization  
Ontology : EGO-EBImolecular_function  nuclear envelope  nuclear envelope  nuclear inner membrane  integral component of membrane  nuclear membrane organization  
NDEx NetworkNEMP1
Atlas of Cancer Signalling NetworkNEMP1
Wikipedia pathwaysNEMP1
Orthology - Evolution
OrthoDB23306
GeneTree (enSembl)ENSG00000166881
Phylogenetic Trees/Animal Genes : TreeFamNEMP1
Homologs : HomoloGeneNEMP1
Homology/Alignments : Family Browser (UCSC)NEMP1
Gene fusions - Rearrangements
Fusion : QuiverNEMP1
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerNEMP1 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)NEMP1
dbVarNEMP1
ClinVarNEMP1
MonarchNEMP1
1000_GenomesNEMP1 
Exome Variant ServerNEMP1
GNOMAD BrowserENSG00000166881
Varsome BrowserNEMP1
ACMGNEMP1 variants
VarityO14524
Genomic Variants (DGV)NEMP1 [DGVbeta]
DECIPHERNEMP1 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisNEMP1 
Mutations
ICGC Data PortalNEMP1 
TCGA Data PortalNEMP1 
Broad Tumor PortalNEMP1
OASIS PortalNEMP1 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICNEMP1  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DNEMP1
Mutations and Diseases : HGMDNEMP1
LOVD (Leiden Open Variation Database)[gene] [transcripts] [variants]
BioMutaNEMP1
DgiDB (Drug Gene Interaction Database)NEMP1
DoCM (Curated mutations)NEMP1
CIViC (Clinical Interpretations of Variants in Cancer)NEMP1
Cancer3DNEMP1
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM616496   
Orphanet
DisGeNETNEMP1
MedgenNEMP1
Genetic Testing Registry NEMP1
NextProtO14524 [Medical]
GENETestsNEMP1
Target ValidationNEMP1
Huge Navigator NEMP1 [HugePedia]
ClinGenNEMP1
Clinical trials, drugs, therapy
MyCancerGenomeNEMP1
Protein Interactions : CTDNEMP1
PharosO14524
Clinical trialNEMP1
Miscellaneous
canSAR (ICR)NEMP1
HarmonizomeNEMP1
DataMed IndexNEMP1
Probes
Litterature
PubMed25 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXNEMP1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Oct 4 15:22:33 CEST 2021

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