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NEMP1 (nuclear envelope integral membrane protein 1)

Identity

Alias_namesTMEM194
TMEM194A
transmembrane protein 194
transmembrane protein 194A
Alias_symbol (synonym)KIAA0286
Other alias
HGNC (Hugo) NEMP1
LocusID (NCBI) 23306
Atlas_Id 74860
Location 12q13.3  [Link to chromosome band 12q13]
Location_base_pair Starts at 57055643 and ends at 57078791 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
LRP1 (12q13.3) / NEMP1 (12q13.3)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)NEMP1   29001
Cards
Entrez_Gene (NCBI)NEMP1  23306  nuclear envelope integral membrane protein 1
AliasesTMEM194; TMEM194A
GeneCards (Weizmann)NEMP1
Ensembl hg19 (Hinxton)ENSG00000166881 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000166881 [Gene_View]  chr12:57055643-57078791 [Contig_View]  NEMP1 [Vega]
ICGC DataPortalENSG00000166881
TCGA cBioPortalNEMP1
AceView (NCBI)NEMP1
Genatlas (Paris)NEMP1
WikiGenes23306
SOURCE (Princeton)NEMP1
Genetics Home Reference (NIH)NEMP1
Genomic and cartography
GoldenPath hg38 (UCSC)NEMP1  -     chr12:57055643-57078791 -  12q13.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)NEMP1  -     12q13.3   [Description]    (hg19-Feb_2009)
EnsemblNEMP1 - 12q13.3 [CytoView hg19]  NEMP1 - 12q13.3 [CytoView hg38]
Mapping of homologs : NCBINEMP1 [Mapview hg19]  NEMP1 [Mapview hg38]
OMIM616496   
Gene and transcription
Genbank (Entrez)AB006624 AK294566 AL833310 AL833311 BC071597
RefSeq transcript (Entrez)NM_001130963 NM_015257
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)NEMP1
Cluster EST : UnigeneHs.591040 [ NCBI ]
CGAP (NCI)Hs.591040
Alternative Splicing GalleryENSG00000166881
Gene ExpressionNEMP1 [ NCBI-GEO ]   NEMP1 [ EBI - ARRAY_EXPRESS ]   NEMP1 [ SEEK ]   NEMP1 [ MEM ]
Gene Expression Viewer (FireBrowse)NEMP1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)23306
GTEX Portal (Tissue expression)NEMP1
Protein : pattern, domain, 3D structure
UniProt/SwissProtO14524   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtO14524  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProO14524
Splice isoforms : SwissVarO14524
PhosPhoSitePlusO14524
Domains : Interpro (EBI)NEMP_fam   
Domain families : Pfam (Sanger)NEMP (PF10225)   
Domain families : Pfam (NCBI)pfam10225   
Conserved Domain (NCBI)NEMP1
DMDM Disease mutations23306
Blocks (Seattle)NEMP1
SuperfamilyO14524
Human Protein AtlasENSG00000166881
Peptide AtlasO14524
HPRD13793
IPIIPI00215874   IPI00470888   IPI01025498   
Protein Interaction databases
DIP (DOE-UCLA)O14524
IntAct (EBI)O14524
FunCoupENSG00000166881
BioGRIDNEMP1
STRING (EMBL)NEMP1
ZODIACNEMP1
Ontologies - Pathways
QuickGOO14524
Ontology : AmiGOmolecular_function  nuclear envelope  nuclear envelope  nuclear inner membrane  biological_process  integral component of membrane  
Ontology : EGO-EBImolecular_function  nuclear envelope  nuclear envelope  nuclear inner membrane  biological_process  integral component of membrane  
NDEx NetworkNEMP1
Atlas of Cancer Signalling NetworkNEMP1
Wikipedia pathwaysNEMP1
Orthology - Evolution
OrthoDB23306
GeneTree (enSembl)ENSG00000166881
Phylogenetic Trees/Animal Genes : TreeFamNEMP1
HOVERGENO14524
HOGENOMO14524
Homologs : HomoloGeneNEMP1
Homology/Alignments : Family Browser (UCSC)NEMP1
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerNEMP1 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)NEMP1
dbVarNEMP1
ClinVarNEMP1
1000_GenomesNEMP1 
Exome Variant ServerNEMP1
ExAC (Exome Aggregation Consortium)NEMP1 (select the gene name)
Genetic variants : HAPMAP23306
Genomic Variants (DGV)NEMP1 [DGVbeta]
DECIPHERNEMP1 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisNEMP1 
Mutations
ICGC Data PortalNEMP1 
TCGA Data PortalNEMP1 
Broad Tumor PortalNEMP1
OASIS PortalNEMP1 [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDNEMP1
BioMutasearch NEMP1
DgiDB (Drug Gene Interaction Database)NEMP1
DoCM (Curated mutations)NEMP1 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)NEMP1 (select a term)
intoGenNEMP1
Cancer3DNEMP1(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM616496   
Orphanet
MedgenNEMP1
Genetic Testing Registry NEMP1
NextProtO14524 [Medical]
TSGene23306
GENETestsNEMP1
Target ValidationNEMP1
Huge Navigator NEMP1 [HugePedia]
snp3D : Map Gene to Disease23306
BioCentury BCIQNEMP1
ClinGenNEMP1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD23306
Chemical/Pharm GKB GenePA162406290
Clinical trialNEMP1
Miscellaneous
canSAR (ICR)NEMP1 (select the gene name)
Probes
Litterature
PubMed10 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineNEMP1
EVEXNEMP1
GoPubMedNEMP1
iHOPNEMP1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed May 31 15:32:33 CEST 2017

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