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NEMP2 (nuclear envelope integral membrane protein 2)

Identity

Alias_namesTMEM194B
transmembrane protein 194B
Other alias
HGNC (Hugo) NEMP2
LocusID (NCBI) 100131211
Atlas_Id 74861
Location 2q32.2  [Link to chromosome band 2q32]
Location_base_pair Starts at 190506893 and ends at 190534742 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)NEMP2   33700
Cards
Entrez_Gene (NCBI)NEMP2  100131211  nuclear envelope integral membrane protein 2
AliasesTMEM194B
GeneCards (Weizmann)NEMP2
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr2:190506893-190534742 [Contig_View]  NEMP2 [Vega]
TCGA cBioPortalNEMP2
AceView (NCBI)NEMP2
Genatlas (Paris)NEMP2
WikiGenes100131211
SOURCE (Princeton)NEMP2
Genetics Home Reference (NIH)NEMP2
Genomic and cartography
GoldenPath hg38 (UCSC)NEMP2  -     chr2:190506893-190534742 -  2q32.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)NEMP2  -     2q32.2   [Description]    (hg19-Feb_2009)
EnsemblNEMP2 - 2q32.2 [CytoView hg19]  NEMP2 - 2q32.2 [CytoView hg38]
Mapping of homologs : NCBINEMP2 [Mapview hg19]  NEMP2 [Mapview hg38]
OMIM616497   
Gene and transcription
Genbank (Entrez)AA521390 AK296987 AK302425 DA417772
RefSeq transcript (Entrez)NM_001142645
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)NEMP2
Cluster EST : UnigeneHs.659824 [ NCBI ]
CGAP (NCI)Hs.659824
Gene ExpressionNEMP2 [ NCBI-GEO ]   NEMP2 [ EBI - ARRAY_EXPRESS ]   NEMP2 [ SEEK ]   NEMP2 [ MEM ]
Gene Expression Viewer (FireBrowse)NEMP2 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)100131211
GTEX Portal (Tissue expression)NEMP2
Protein : pattern, domain, 3D structure
UniProt/SwissProtA6NFY4   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtA6NFY4  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProA6NFY4
Splice isoforms : SwissVarA6NFY4
PhosPhoSitePlusA6NFY4
Domains : Interpro (EBI)NEMP_fam   
Domain families : Pfam (Sanger)NEMP (PF10225)   
Domain families : Pfam (NCBI)pfam10225   
Conserved Domain (NCBI)NEMP2
DMDM Disease mutations100131211
Blocks (Seattle)NEMP2
SuperfamilyA6NFY4
Peptide AtlasA6NFY4
IPIIPI00400964   IPI00916310   IPI00917303   IPI00917745   IPI00916984   
Protein Interaction databases
DIP (DOE-UCLA)A6NFY4
IntAct (EBI)A6NFY4
BioGRIDNEMP2
STRING (EMBL)NEMP2
ZODIACNEMP2
Ontologies - Pathways
QuickGOA6NFY4
Ontology : AmiGOnuclear envelope  nuclear inner membrane  integral component of membrane  
Ontology : EGO-EBInuclear envelope  nuclear inner membrane  integral component of membrane  
NDEx NetworkNEMP2
Atlas of Cancer Signalling NetworkNEMP2
Wikipedia pathwaysNEMP2
Orthology - Evolution
OrthoDB100131211
Phylogenetic Trees/Animal Genes : TreeFamNEMP2
HOVERGENA6NFY4
HOGENOMA6NFY4
Homologs : HomoloGeneNEMP2
Homology/Alignments : Family Browser (UCSC)NEMP2
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerNEMP2 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)NEMP2
dbVarNEMP2
ClinVarNEMP2
1000_GenomesNEMP2 
Exome Variant ServerNEMP2
ExAC (Exome Aggregation Consortium)NEMP2 (select the gene name)
Genetic variants : HAPMAP100131211
Genomic Variants (DGV)NEMP2 [DGVbeta]
DECIPHERNEMP2 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisNEMP2 
Mutations
ICGC Data PortalNEMP2 
TCGA Data PortalNEMP2 
Broad Tumor PortalNEMP2
OASIS PortalNEMP2 [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDNEMP2
BioMutasearch NEMP2
DgiDB (Drug Gene Interaction Database)NEMP2
DoCM (Curated mutations)NEMP2 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)NEMP2 (select a term)
intoGenNEMP2
Cancer3DNEMP2(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM616497   
Orphanet
MedgenNEMP2
Genetic Testing Registry NEMP2
NextProtA6NFY4 [Medical]
TSGene100131211
GENETestsNEMP2
Target ValidationNEMP2
Huge Navigator NEMP2 [HugePedia]
snp3D : Map Gene to Disease100131211
BioCentury BCIQNEMP2
ClinGenNEMP2
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100131211
Chemical/Pharm GKB GenePA162406311
Clinical trialNEMP2
Miscellaneous
canSAR (ICR)NEMP2 (select the gene name)
Probes
Litterature
PubMed4 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineNEMP2
EVEXNEMP2
GoPubMedNEMP2
iHOPNEMP2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Aug 1 16:33:36 CEST 2017

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