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NEURL2 (neuralized E3 ubiquitin protein ligase 2)

Identity

Alias_namesC20orf163
chromosome 20 open reading frame 163
neuralized-like 2 (Drosophila)
neuralized homolog 2 (Drosophila)
Alias_symbol (synonym)dJ337O18.6
FLJ30259
Ozz
Ozz-E3
Other aliasOZZ
OZZ-E3
HGNC (Hugo) NEURL2
LocusID (NCBI) 140825
Atlas_Id 47348
Location 20q13.12  [Link to chromosome band 20q13]
Location_base_pair Starts at 45888472 and ends at 45891287 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)NEURL2   16156
Cards
Entrez_Gene (NCBI)NEURL2  140825  neuralized E3 ubiquitin protein ligase 2
AliasesC20orf163; OZZ; OZZ-E3
GeneCards (Weizmann)NEURL2
Ensembl hg19 (Hinxton)ENSG00000124257 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000124257 [Gene_View]  chr20:45888472-45891287 [Contig_View]  NEURL2 [Vega]
ICGC DataPortalENSG00000124257
TCGA cBioPortalNEURL2
AceView (NCBI)NEURL2
Genatlas (Paris)NEURL2
WikiGenes140825
SOURCE (Princeton)NEURL2
Genetics Home Reference (NIH)NEURL2
Genomic and cartography
GoldenPath hg38 (UCSC)NEURL2  -     chr20:45888472-45891287 -  20q13.12   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)NEURL2  -     20q13.12   [Description]    (hg19-Feb_2009)
EnsemblNEURL2 - 20q13.12 [CytoView hg19]  NEURL2 - 20q13.12 [CytoView hg38]
Mapping of homologs : NCBINEURL2 [Mapview hg19]  NEURL2 [Mapview hg38]
OMIM608597   
Gene and transcription
Genbank (Entrez)AJ295985 AK054821 AW298115 AW515245 BC074737
RefSeq transcript (Entrez)NM_001278535 NM_080749
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)NEURL2
Cluster EST :"UnigdnmHs.609336 [ NCBI ]
CGAP (NCI)Hs.609336
Alternative Splicing GalleryENSG00000124257
Gene ExpressionNEURL2 [ NCBI-GEO ]   NEURL2 [ EBI - ARRAY_EXPRESS ]   NEURL2 [ SEEK ]   NEURL2 [ MEM ]
Gene Expression Viewer (FireBrowse)NEURL2 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)140825
GTEX Portal (Tissue expression)NEURL2
Human Protein AtlasENSG00000124257-NEURL2 [pathology]   [cell]   [tissue]
Protein : pattern, domaiN, 3D0s˘ructure
UniProt/SwissProtQ9BR09   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9BR09  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9BR09
Splice isoforms : SwissVarQ9BR09
PhosPhoSitePlusQ9BR09
Domaine pattern : Prosite (Expaxy)NHR (PS51065)    SOCS (PS50225)   
Domains : Interpro (EBI)NHR_dom    SOCS_box   
Domain families : Pfam (Sanger)Neuralized (PF07177)    SOCS_box (PF07525)   
Domain families : Pfam (NCBI)pfam07177    pfam07525   
Domain families : Smart (EMBL)NEUZ (SM00588)  SOCS_box (SM00969)  
Conserved Domain (NCBI)NEURL2
DMDM Disease mutations140825
Blocks (Seattle)NEURL2
SuperfamilyQ9BR09
Human Protein Atlas [tissue]ENSG00000124257-NEURL2 [tissue]
Peptide AtlasQ9BR09
HPRD16353
IPIIPI00011805   IPI01010148   
Protein Interaction databases
DIP (DOE-UCLA)Q9BR09
IntAct (EBI)Q9BR09
FunCoupENSG00000124257
BioGRIDNEURL2
STRING (EMBL)NEURL2
ZODIACNEURL2
Ontologies - Pathways
QuickGOQ9BR09
Ontology : AmiGOcytoplasm  protein ubiquitination  intracellular signal transduction  
Ontology : EGO-EBIcytoplasm  protein ubiquitination  intracellular signal transduction  
NDEx NetworkNEURL2
Atlas of Cancer Signalling NetworkNEURL2
Wikipedia pathwaysNEURL2
Orthology - Evolution
OrthoDB140825
GeneTree (enSembl)ENSG00000124257
Phylogenetic Trees/Animal Genes : TreeFamNEURL2
HOVERGENQ9BR09
HOGENOMQ9BR09
Homologs : HomoloGeneNEURL2
Homology/Alignments : Family Browser (UCSC)NEURL2
Gene fusions - Rearrangements
Fusion: Tumor Portal NEURL2
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerNEURL2 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)NEURL2
dbVarNEURL2
ClinVarNEURL2
1000_GenomesNEURL2 
Exome Variant ServerNEURL2
ExAC (Exome Aggregation Consortium)ENSG00000124257
GNOMAD BrowserENSG00000124257
Genetic variants : HAPMAP140825
Genomic Variants (DGV)NEURL2 [DGVbeta]
DECIPHERNEURL2 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisNEURL2 
Mutations
ICGC Data PortalNEURL2 
TCGA Data PortalNEURL2 
Broad Tumor PortalNEURL2
OASIS PortalNEURL2 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICNEURL2  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDNEURL2
BioMutasearch NEURL2
DgiDB (Drug Gene Interaction Database)NEURL2
DoCM (Curated mutations)NEURL2 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)NEURL2 (select a term)
intoGenNEURL2
Cancer3DNEURL2(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM608597   
Orphanet
MedgenNEURL2
Genetic Testing Registry NEURL2
NextProtQ9BR09 [Medical]
TSGene140825
GENETestsNEURL2
Target ValidationNEURL2
Huge Navigator NEURL2 [HugePedia]
snp3D : Map Gene to Disease140825
BioCentury BCIQNEURL2
ClinGenNEURL2
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD140825
Chemical/Pharm GKB GenePA25705
Clinical trialNEURL2
Miscellaneous
canSAR (ICR)NEURL2 (select the gene name)
Probes
Litterature
PubMed9 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineNEURL2
EVEXNEURL2
GoPubMedNEURL2
iHOPNEURL2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Thu Nov 9 13:02:30 CET 2017

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