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NEURL4 (neuralized E3 ubiquitin protein ligase 4)

Identity

Alias_namesneuralized homolog 4 (Drosophila)
Alias_symbol (synonym)KIAA1787
Other alias-
HGNC (Hugo) NEURL4
LocusID (NCBI) 84461
Atlas_Id 70805
Location 17p13.1  [Link to chromosome band 17p13]
Location_base_pair Starts at 7315632 and ends at 7329319 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)NEURL4   34410
Cards
Entrez_Gene (NCBI)NEURL4  84461  neuralized E3 ubiquitin protein ligase 4
Aliases
GeneCards (Weizmann)NEURL4
Ensembl hg19 (Hinxton)ENSG00000215041 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000215041 [Gene_View]  chr17:7315632-7329319 [Contig_View]  NEURL4 [Vega]
ICGC DataPortalENSG00000215041
TCGA cBioPortalNEURL4
AceView (NCBI)NEURL4
Genatlas (Paris)NEURL4
WikiGenes84461
SOURCE (Princeton)NEURL4
Genetics Home Reference (NIH)NEURL4
Genomic and cartography
GoldenPath hg38 (UCSC)NEURL4  -     chr17:7315632-7329319 -  17p13.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)NEURL4  -     17p13.1   [Description]    (hg19-Feb_2009)
EnsemblNEURL4 - 17p13.1 [CytoView hg19]  NEURL4 - 17p13.1 [CytoView hg38]
Mapping of homologs : NCBINEURL4 [Mapview hg19]  NEURL4 [Mapview hg38]
OMIM615865   
Gene and transcription
Genbank (Entrez)AB058690 AL136870 AL833570 BC007227 BC073134
RefSeq transcript (Entrez)NM_001005408 NM_032442
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)NEURL4
Cluster EST : UnigeneHs.654794 [ NCBI ]
CGAP (NCI)Hs.654794
Alternative Splicing GalleryENSG00000215041
Gene ExpressionNEURL4 [ NCBI-GEO ]   NEURL4 [ EBI - ARRAY_EXPRESS ]   NEURL4 [ SEEK ]   NEURL4 [ MEM ]
Gene Expression Viewer (FireBrowse)NEURL4 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)84461
GTEX Portal (Tissue expression)NEURL4
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ96JN8   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ96JN8  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ96JN8
Splice isoforms : SwissVarQ96JN8
PhosPhoSitePlusQ96JN8
Domaine pattern : Prosite (Expaxy)NHR (PS51065)   
Domains : Interpro (EBI)ConA-like_dom    NHR_dom   
Domain families : Pfam (Sanger)Neuralized (PF07177)   
Domain families : Pfam (NCBI)pfam07177   
Domain families : Smart (EMBL)NEUZ (SM00588)  
Conserved Domain (NCBI)NEURL4
DMDM Disease mutations84461
Blocks (Seattle)NEURL4
PDB (SRS)2.00E+63   
PDB (PDBSum)2.00E+63   
PDB (IMB)2.00E+63   
PDB (RSDB)2.00E+63   
Structural Biology KnowledgeBase2.00E+63   
SCOP (Structural Classification of Proteins)2.00E+63   
CATH (Classification of proteins structures)2.00E+63   
SuperfamilyQ96JN8
Human Protein AtlasENSG00000215041
Peptide AtlasQ96JN8
HPRD13894
IPIIPI00064219   IPI00470589   
Protein Interaction databases
DIP (DOE-UCLA)Q96JN8
IntAct (EBI)Q96JN8
FunCoupENSG00000215041
BioGRIDNEURL4
STRING (EMBL)NEURL4
ZODIACNEURL4
Ontologies - Pathways
QuickGOQ96JN8
Ontology : AmiGOprotein binding  centriole  
Ontology : EGO-EBIprotein binding  centriole  
NDEx NetworkNEURL4
Atlas of Cancer Signalling NetworkNEURL4
Wikipedia pathwaysNEURL4
Orthology - Evolution
OrthoDB84461
GeneTree (enSembl)ENSG00000215041
Phylogenetic Trees/Animal Genes : TreeFamNEURL4
HOVERGENQ96JN8
HOGENOMQ96JN8
Homologs : HomoloGeneNEURL4
Homology/Alignments : Family Browser (UCSC)NEURL4
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerNEURL4 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)NEURL4
dbVarNEURL4
ClinVarNEURL4
1000_GenomesNEURL4 
Exome Variant ServerNEURL4
ExAC (Exome Aggregation Consortium)NEURL4 (select the gene name)
Genetic variants : HAPMAP84461
Genomic Variants (DGV)NEURL4 [DGVbeta]
DECIPHERNEURL4 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisNEURL4 
Mutations
ICGC Data PortalNEURL4 
TCGA Data PortalNEURL4 
Broad Tumor PortalNEURL4
OASIS PortalNEURL4 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICNEURL4  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDNEURL4
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch NEURL4
DgiDB (Drug Gene Interaction Database)NEURL4
DoCM (Curated mutations)NEURL4 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)NEURL4 (select a term)
intoGenNEURL4
Cancer3DNEURL4(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM615865   
Orphanet
MedgenNEURL4
Genetic Testing Registry NEURL4
NextProtQ96JN8 [Medical]
TSGene84461
GENETestsNEURL4
Target ValidationNEURL4
Huge Navigator NEURL4 [HugePedia]
snp3D : Map Gene to Disease84461
BioCentury BCIQNEURL4
ClinGenNEURL4
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD84461
Chemical/Pharm GKB GenePA164723835
Clinical trialNEURL4
Miscellaneous
canSAR (ICR)NEURL4 (select the gene name)
Probes
Litterature
PubMed18 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineNEURL4
EVEXNEURL4
GoPubMedNEURL4
iHOPNEURL4
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:31:58 CEST 2017

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