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NEXMIF (neurite extension and migration factor)

Identity

Alias_namesKIAA2022
KIAA2022
Alias_symbol (synonym)XPN
MRX98
KIDLIA
Other alias
HGNC (Hugo) NEXMIF
LocusID (NCBI) 340533
Atlas_Id 79981
Location Xq13.3  [Link to chromosome band Xq13]
Location_base_pair Starts at 74732856 and ends at 74925452 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)NEXMIF   29433
Cards
Entrez_Gene (NCBI)NEXMIF  340533  neurite extension and migration factor
AliasesKIAA2022; KIDLIA; MRX98; XPN
GeneCards (Weizmann)NEXMIF
Ensembl hg19 (Hinxton)ENSG00000050030 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000050030 [Gene_View]  chrX:74732856-74925452 [Contig_View]  NEXMIF [Vega]
ICGC DataPortalENSG00000050030
TCGA cBioPortalNEXMIF
AceView (NCBI)NEXMIF
Genatlas (Paris)NEXMIF
WikiGenes340533
SOURCE (Princeton)NEXMIF
Genetics Home Reference (NIH)NEXMIF
Genomic and cartography
GoldenPath hg38 (UCSC)NEXMIF  -     chrX:74732856-74925452 -  Xq13.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)NEXMIF  -     Xq13.3   [Description]    (hg19-Feb_2009)
EnsemblNEXMIF - Xq13.3 [CytoView hg19]  NEXMIF - Xq13.3 [CytoView hg38]
Mapping of homologs : NCBINEXMIF [Mapview hg19]  NEXMIF [Mapview hg38]
OMIM300524   300912   
Gene and transcription
Genbank (Entrez)AB095942 AI167637 AK128651 AK307471 AY563507
RefSeq transcript (Entrez)NM_001008537
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)NEXMIF
Cluster EST : UnigeneHs.124128 [ NCBI ]
CGAP (NCI)Hs.124128
Alternative Splicing GalleryENSG00000050030
Gene ExpressionNEXMIF [ NCBI-GEO ]   NEXMIF [ EBI - ARRAY_EXPRESS ]   NEXMIF [ SEEK ]   NEXMIF [ MEM ]
Gene Expression Viewer (FireBrowse)NEXMIF [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)340533
GTEX Portal (Tissue expression)NEXMIF
Human Protein AtlasENSG00000050030-NEXMIF [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ5QGS0   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ5QGS0  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ5QGS0
Splice isoforms : SwissVarQ5QGS0
PhosPhoSitePlusQ5QGS0
Domains : Interpro (EBI)DUF4683   
Domain families : Pfam (Sanger)DUF4683 (PF15735)   
Domain families : Pfam (NCBI)pfam15735   
Conserved Domain (NCBI)NEXMIF
DMDM Disease mutations340533
Blocks (Seattle)NEXMIF
SuperfamilyQ5QGS0
Human Protein Atlas [tissue]ENSG00000050030-NEXMIF [tissue]
Peptide AtlasQ5QGS0
IPIIPI00238220   IPI00645516   
Protein Interaction databases
DIP (DOE-UCLA)Q5QGS0
IntAct (EBI)Q5QGS0
FunCoupENSG00000050030
BioGRIDNEXMIF
STRING (EMBL)NEXMIF
ZODIACNEXMIF
Ontologies - Pathways
QuickGOQ5QGS0
Ontology : AmiGOnucleus  nervous system development  zeta DNA polymerase complex  error-prone translesion synthesis  
Ontology : EGO-EBInucleus  nervous system development  zeta DNA polymerase complex  error-prone translesion synthesis  
NDEx NetworkNEXMIF
Atlas of Cancer Signalling NetworkNEXMIF
Wikipedia pathwaysNEXMIF
Orthology - Evolution
OrthoDB340533
GeneTree (enSembl)ENSG00000050030
Phylogenetic Trees/Animal Genes : TreeFamNEXMIF
HOVERGENQ5QGS0
HOGENOMQ5QGS0
Homologs : HomoloGeneNEXMIF
Homology/Alignments : Family Browser (UCSC)NEXMIF
Gene fusions - Rearrangements
Tumor Fusion PortalNEXMIF
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerNEXMIF [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)NEXMIF
dbVarNEXMIF
ClinVarNEXMIF
1000_GenomesNEXMIF 
Exome Variant ServerNEXMIF
ExAC (Exome Aggregation Consortium)ENSG00000050030
GNOMAD BrowserENSG00000050030
Genetic variants : HAPMAP340533
Genomic Variants (DGV)NEXMIF [DGVbeta]
DECIPHERNEXMIF [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisNEXMIF 
Mutations
ICGC Data PortalNEXMIF 
TCGA Data PortalNEXMIF 
Broad Tumor PortalNEXMIF
OASIS PortalNEXMIF [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDNEXMIF
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch NEXMIF
DgiDB (Drug Gene Interaction Database)NEXMIF
DoCM (Curated mutations)NEXMIF (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)NEXMIF (select a term)
intoGenNEXMIF
Cancer3DNEXMIF(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM300524    300912   
Orphanet
DisGeNETNEXMIF
MedgenNEXMIF
Genetic Testing Registry NEXMIF
NextProtQ5QGS0 [Medical]
TSGene340533
GENETestsNEXMIF
Target ValidationNEXMIF
Huge Navigator NEXMIF [HugePedia]
snp3D : Map Gene to Disease340533
BioCentury BCIQNEXMIF
ClinGenNEXMIF
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD340533
Chemical/Pharm GKB GenePA162393214
Clinical trialNEXMIF
Miscellaneous
canSAR (ICR)NEXMIF (select the gene name)
Probes
Litterature
PubMed13 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineNEXMIF
EVEXNEXMIF
GoPubMedNEXMIF
iHOPNEXMIF
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Nov 21 14:00:14 CET 2017

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