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NFE4 (nuclear factor, erythroid 4)

Identity

Alias_symbol (synonym)NF-E4
Other alias
HGNC (Hugo) NFE4
LocusID (NCBI) 58160
Atlas_Id 79527
Location 7q22.1  [Link to chromosome band 7q22]
Location_base_pair Starts at 102973437 and ends at 102978667 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)NFE4   29902
Cards
Entrez_Gene (NCBI)NFE4  58160  nuclear factor, erythroid 4
AliasesNF-E4
GeneCards (Weizmann)NFE4
Ensembl hg19 (Hinxton)ENSG00000230257 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000230257 [Gene_View]  chr7:102973437-102978667 [Contig_View]  NFE4 [Vega]
ICGC DataPortalENSG00000230257
TCGA cBioPortalNFE4
AceView (NCBI)NFE4
Genatlas (Paris)NFE4
WikiGenes58160
SOURCE (Princeton)NFE4
Genetics Home Reference (NIH)NFE4
Genomic and cartography
GoldenPath hg38 (UCSC)NFE4  -     chr7:102973437-102978667 +  7q22.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)NFE4  -     7q22.1   [Description]    (hg19-Feb_2009)
EnsemblNFE4 - 7q22.1 [CytoView hg19]  NFE4 - 7q22.1 [CytoView hg38]
Mapping of homologs : NCBINFE4 [Mapview hg19]  NFE4 [Mapview hg38]
OMIM612133   
Gene and transcription
Genbank (Entrez)AY258907 BC036938
RefSeq transcript (Entrez)NM_001085386
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)NFE4
Cluster EST : UnigeneHs.621233 [ NCBI ]
CGAP (NCI)Hs.621233
Alternative Splicing GalleryENSG00000230257
Gene ExpressionNFE4 [ NCBI-GEO ]   NFE4 [ EBI - ARRAY_EXPRESS ]   NFE4 [ SEEK ]   NFE4 [ MEM ]
Gene Expression Viewer (FireBrowse)NFE4 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)58160
GTEX Portal (Tissue expression)NFE4
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ86UQ8   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ86UQ8  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ86UQ8
Splice isoforms : SwissVarQ86UQ8
PhosPhoSitePlusQ86UQ8
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)NFE4
DMDM Disease mutations58160
Blocks (Seattle)NFE4
SuperfamilyQ86UQ8
Human Protein AtlasENSG00000230257
Peptide AtlasQ86UQ8
IPIIPI00384233   IPI00910551   
Protein Interaction databases
DIP (DOE-UCLA)Q86UQ8
IntAct (EBI)Q86UQ8
FunCoupENSG00000230257
BioGRIDNFE4
STRING (EMBL)NFE4
ZODIACNFE4
Ontologies - Pathways
QuickGOQ86UQ8
Ontology : AmiGOnucleus  transcription, DNA-templated  regulation of transcription, DNA-templated  
Ontology : EGO-EBInucleus  transcription, DNA-templated  regulation of transcription, DNA-templated  
NDEx NetworkNFE4
Atlas of Cancer Signalling NetworkNFE4
Wikipedia pathwaysNFE4
Orthology - Evolution
OrthoDB58160
GeneTree (enSembl)ENSG00000230257
Phylogenetic Trees/Animal Genes : TreeFamNFE4
HOVERGENQ86UQ8
HOGENOMQ86UQ8
Homologs : HomoloGeneNFE4
Homology/Alignments : Family Browser (UCSC)NFE4
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerNFE4 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)NFE4
dbVarNFE4
ClinVarNFE4
1000_GenomesNFE4 
Exome Variant ServerNFE4
ExAC (Exome Aggregation Consortium)NFE4 (select the gene name)
Genetic variants : HAPMAP58160
Genomic Variants (DGV)NFE4 [DGVbeta]
DECIPHERNFE4 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisNFE4 
Mutations
ICGC Data PortalNFE4 
TCGA Data PortalNFE4 
Broad Tumor PortalNFE4
OASIS PortalNFE4 [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDNFE4
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch NFE4
DgiDB (Drug Gene Interaction Database)NFE4
DoCM (Curated mutations)NFE4 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)NFE4 (select a term)
intoGenNFE4
Cancer3DNFE4(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM612133   
Orphanet
MedgenNFE4
Genetic Testing Registry NFE4
NextProtQ86UQ8 [Medical]
TSGene58160
GENETestsNFE4
Target ValidationNFE4
Huge Navigator NFE4 [HugePedia]
snp3D : Map Gene to Disease58160
BioCentury BCIQNFE4
ClinGenNFE4
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD58160
Chemical/Pharm GKB GenePA166123708
Clinical trialNFE4
Miscellaneous
canSAR (ICR)NFE4 (select the gene name)
Probes
Litterature
PubMed6 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineNFE4
EVEXNFE4
GoPubMedNFE4
iHOPNFE4
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:31:59 CEST 2017

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