| Nomenclature |
HGNC (Hugo) | NFIL3 7787 |
| Cards |
Entrez_Gene (NCBI) | NFIL3 nuclear factor, interleukin 3 regulated |
Aliases | E4BP4; IL3BP1; NF-IL3A; NFIL3A |
GeneCards (Weizmann) | NFIL3 |
Ensembl hg19 (Hinxton) | ENSG00000165030 [Gene_View] |
Ensembl hg38 (Hinxton) | ENSG00000165030 [Gene_View]  ENSG00000165030 [Sequence] chr9:91409045-91423832 [Contig_View] NFIL3 [Vega] |
ICGC DataPortal | ENSG00000165030 |
TCGA cBioPortal | NFIL3 |
AceView (NCBI) | NFIL3 |
Genatlas (Paris) | NFIL3 |
SOURCE (Princeton) | NFIL3 |
Genetics Home Reference (NIH) | NFIL3 |
| Genomic and cartography |
GoldenPath hg38 (UCSC) | NFIL3 - chr9:91409045-91423832 - 9q22.31 [Description] (hg38-Dec_2013) |
GoldenPath hg19 (UCSC) | NFIL3 - 9q22.31 [Description] (hg19-Feb_2009) |
GoldenPath | NFIL3 - 9q22.31 [CytoView hg19] NFIL3 - 9q22.31 [CytoView hg38] |
ImmunoBase | ENSG00000165030 |
genome Data Viewer NCBI | NFIL3 [Mapview hg19] |
OMIM | 605327 |
| Gene and transcription |
Genbank (Entrez) | AK313970 AW163045 BC008197 BQ937243 CR542049 |
RefSeq transcript (Entrez) | NM_001289999 NM_001290000 NM_005384 |
RefSeq genomic (Entrez) | |
Consensus coding sequences : CCDS (NCBI) | NFIL3 |
Alternative Splicing Gallery | ENSG00000165030 |
Gene Expression | NFIL3 [ NCBI-GEO ] NFIL3 [ EBI - ARRAY_EXPRESS ]
NFIL3 [ SEEK ] NFIL3 [ MEM ] |
Gene Expression Viewer (FireBrowse) | NFIL3 [ Firebrowse - Broad ] |
Genevisible | Expression of NFIL3 in : [tissues]  [cell-lines]  [cancer]  [perturbations]   |
BioGPS (Tissue expression) | 4783 |
GTEX Portal (Tissue expression) | NFIL3 |
Human Protein Atlas | ENSG00000165030-NFIL3 [pathology] [cell] [tissue] |
| Protein : pattern, domain, 3D structure |
UniProt/SwissProt | Q16649 [function] [subcellular_location] [family_and_domains] [pathology_and_biotech] [ptm_processing] [expression] [interaction] |
NextProt | Q16649 [Sequence] [Exons] [Medical] [Publications] |
With graphics : InterPro | Q16649 |
Splice isoforms : SwissVar | Q16649 |
PhosPhoSitePlus | Q16649 |
Domaine pattern : Prosite (Expaxy) | BZIP (PS50217) BZIP_BASIC (PS00036) |
Domains : Interpro (EBI) | bZIP NFIL3/E4BP4 Vert_IL3-reg_TF |
Domain families : Pfam (Sanger) | bZIP_2 (PF07716) Vert_IL3-reg_TF (PF06529) |
Domain families : Pfam (NCBI) | pfam07716 pfam06529 |
Domain families : Smart (EMBL) | BRLZ (SM00338) |
Conserved Domain (NCBI) | NFIL3 |
Blocks (Seattle) | NFIL3 |
Superfamily | Q16649 |
Human Protein Atlas [tissue] | ENSG00000165030-NFIL3 [tissue] |
Peptide Atlas | Q16649 |
HPRD | 05619 |
IPI | IPI00290562 IPI00983119 |
| Protein Interaction databases |
DIP (DOE-UCLA) | Q16649 |
IntAct (EBI) | Q16649 |
BioGRID | NFIL3 |
STRING (EMBL) | NFIL3 |
ZODIAC | NFIL3 |
| Ontologies - Pathways |
QuickGO | Q16649 |
Ontology : AmiGO | negative regulation of transcription by RNA polymerase II nuclear chromatin RNA polymerase II regulatory region sequence-specific DNA binding RNA polymerase II proximal promoter sequence-specific DNA binding DNA-binding transcription factor activity, RNA polymerase II-specific DNA-binding transcription factor activity, RNA polymerase II-specific DNA-binding transcription repressor activity, RNA polymerase II-specific DNA binding DNA-binding transcription factor activity transcription corepressor activity protein binding nucleus regulation of transcription, DNA-templated transcription by RNA polymerase II immune response circadian rhythm negative regulation of transcription, DNA-templated positive regulation of transcription, DNA-templated cellular response to interleukin-4 |
Ontology : EGO-EBI | negative regulation of transcription by RNA polymerase II nuclear chromatin RNA polymerase II regulatory region sequence-specific DNA binding RNA polymerase II proximal promoter sequence-specific DNA binding DNA-binding transcription factor activity, RNA polymerase II-specific DNA-binding transcription factor activity, RNA polymerase II-specific DNA-binding transcription repressor activity, RNA polymerase II-specific DNA binding DNA-binding transcription factor activity transcription corepressor activity protein binding nucleus regulation of transcription, DNA-templated transcription by RNA polymerase II immune response circadian rhythm negative regulation of transcription, DNA-templated positive regulation of transcription, DNA-templated cellular response to interleukin-4 |
NDEx Network | NFIL3 |
Atlas of Cancer Signalling Network | NFIL3 |
Wikipedia pathways | NFIL3 |
| Orthology - Evolution |
OrthoDB | 4783 |
GeneTree (enSembl) | ENSG00000165030 |
Phylogenetic Trees/Animal Genes : TreeFam | NFIL3 |
HOGENOM | Q16649 |
Homologs : HomoloGene | NFIL3 |
Homology/Alignments : Family Browser (UCSC) | NFIL3 |
| Gene fusions - Rearrangements |
Fusion : Quiver | NFIL3 |
| Polymorphisms : SNP and Copy number variants |
NCBI Variation Viewer | NFIL3 [hg38] |
dbVar | NFIL3 |
ClinVar | NFIL3 |
Monarch | NFIL3 |
1000_Genomes | NFIL3 |
Exome Variant Server | NFIL3 |
GNOMAD Browser | ENSG00000165030 |
Varsome Browser | NFIL3 |
Genomic Variants (DGV) | NFIL3 [DGVbeta] |
DECIPHER | NFIL3 [patients] [syndromes] [variants] [genes] |
CONAN: Copy Number Analysis | NFIL3 |
| Mutations |
ICGC Data Portal | NFIL3 |
TCGA Data Portal | NFIL3 |
Broad Tumor Portal | NFIL3 |
OASIS Portal | NFIL3 [ Somatic mutations - Copy number] |
Somatic Mutations in Cancer : COSMIC | NFIL3 [overview] [genome browser] [tissue] [distribution] |
Somatic Mutations in Cancer : COSMIC3D | NFIL3 |
Mutations and Diseases : HGMD | NFIL3 |
LOVD (Leiden Open Variation Database) | Whole genome datasets |
LOVD (Leiden Open Variation Database) | LOVD - Leiden Open Variation Database |
LOVD (Leiden Open Variation Database) | LOVD 3.0 shared installation |
BioMuta | search NFIL3 |
DgiDB (Drug Gene Interaction Database) | NFIL3 |
DoCM (Curated mutations) | NFIL3 (select the gene name) |
CIViC (Clinical Interpretations of Variants in Cancer) | NFIL3 (select a term) |
intoGen | NFIL3 |
Cancer3D | NFIL3(select the gene name) |
Impact of mutations | [PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser] |
| Diseases |
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OMIM | 605327 |
Orphanet | |
DisGeNET | NFIL3 |
Medgen | NFIL3 |
Genetic Testing Registry | NFIL3
|
NextProt | Q16649 [Medical] |
GENETests | NFIL3 |
Target Validation | NFIL3 |
Huge Navigator |
NFIL3 [HugePedia] |
ClinGen | NFIL3 |
| Clinical trials, drugs, therapy |
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MyCancerGenome | NFIL3 |
Protein Interactions : CTD | |
Pharm GKB Gene | PA31593 |
Pharos | Q16649 |
Clinical trial | NFIL3 |
| Miscellaneous |
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canSAR (ICR) | NFIL3 (select the gene name) |
Harmonizome | NFIL3 |
DataMed Index | NFIL3 |
| Probes |
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| Litterature |
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PubMed | 59 Pubmed reference(s) in Entrez |
GeneRIFs | Gene References Into Functions (Entrez) |
EVEX | NFIL3 |