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NFKBID (NFKB inhibitor delta)

Identity

Alias (NCBI)IkBNS
IkappaBNS
TA-NFKBH
HGNC (Hugo) NFKBID
HGNC Alias symbTA-NFKBH
IkappaBNS
HGNC Alias nameNF-kappa-B inhibitor delta
HGNC Previous namenuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, delta
LocusID (NCBI) 84807
Atlas_Id 70816
Location 19q13.12  [Link to chromosome band 19q13]
Location_base_pair Starts at 35887952 and ends at 35900662 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
KMT2E (7q22.3) / NFKBID (19q13.12)NFKBID (19q13.12) / NXF1 (11q12.3)NFKBID (19q13.12) / ZNF585B (19q13.12)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

 

Nomenclature
HGNC (Hugo)NFKBID   15671
Cards
Entrez_Gene (NCBI)NFKBID    NFKB inhibitor delta
AliasesIkBNS; IkappaBNS; TA-NFKBH
GeneCards (Weizmann)NFKBID
Ensembl hg19 (Hinxton)ENSG00000167604 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000167604 [Gene_View]  ENSG00000167604 [Sequence]  chr19:35887952-35900662 [Contig_View]  NFKBID [Vega]
ICGC DataPortalENSG00000167604
TCGA cBioPortalNFKBID
AceView (NCBI)NFKBID
Genatlas (Paris)NFKBID
SOURCE (Princeton)NFKBID
Genetics Home Reference (NIH)NFKBID
Genomic and cartography
GoldenPath hg38 (UCSC)NFKBID  -     chr19:35887952-35900662 -  19q13.12   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)NFKBID  -     19q13.12   [Description]    (hg19-Feb_2009)
GoldenPathNFKBID - 19q13.12 [CytoView hg19]  NFKBID - 19q13.12 [CytoView hg38]
ImmunoBaseENSG00000167604
Genome Data Viewer NCBINFKBID [Mapview hg19]  
OMIM618887   
Gene and transcription
Genbank (Entrez)AF385433 AF385434 AK126825 BC006273 BC119646
RefSeq transcript (Entrez)NM_001321831 NM_001365705 NM_001365706 NM_032721 NM_139239
Consensus coding sequences : CCDS (NCBI)NFKBID
Gene ExpressionNFKBID [ NCBI-GEO ]   NFKBID [ EBI - ARRAY_EXPRESS ]   NFKBID [ SEEK ]   NFKBID [ MEM ]
Gene Expression Viewer (FireBrowse)NFKBID [ Firebrowse - Broad ]
GenevisibleExpression of NFKBID in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)84807
GTEX Portal (Tissue expression)NFKBID
Human Protein AtlasENSG00000167604-NFKBID [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8NI38   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8NI38  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8NI38
PhosPhoSitePlusQ8NI38
Domaine pattern : Prosite (Expaxy)ANK_REP_REGION (PS50297)    ANK_REPEAT (PS50088)   
Domains : Interpro (EBI)Ankyrin_rpt    Ankyrin_rpt-contain_dom    Ankyrin_rpt-contain_sf   
Domain families : Pfam (Sanger)Ank (PF00023)    Ank_2 (PF12796)   
Domain families : Pfam (NCBI)pfam00023    pfam12796   
Domain families : Smart (EMBL)ANK (SM00248)  
Conserved Domain (NCBI)NFKBID
SuperfamilyQ8NI38
AlphaFold pdb e-kbQ8NI38   
Human Protein Atlas [tissue]ENSG00000167604-NFKBID [tissue]
HPRD18140
Protein Interaction databases
DIP (DOE-UCLA)Q8NI38
IntAct (EBI)Q8NI38
BioGRIDNFKBID
STRING (EMBL)NFKBID
ZODIACNFKBID
Ontologies - Pathways
QuickGOQ8NI38
Ontology : AmiGOprotein binding  nucleus  inflammatory response  regulation of gene expression  T cell receptor signaling pathway  positive regulation of T-helper 17 cell differentiation  
Ontology : EGO-EBIprotein binding  nucleus  inflammatory response  regulation of gene expression  T cell receptor signaling pathway  positive regulation of T-helper 17 cell differentiation  
NDEx NetworkNFKBID
Atlas of Cancer Signalling NetworkNFKBID
Wikipedia pathwaysNFKBID
Orthology - Evolution
OrthoDB84807
GeneTree (enSembl)ENSG00000167604
Phylogenetic Trees/Animal Genes : TreeFamNFKBID
Homologs : HomoloGeneNFKBID
Homology/Alignments : Family Browser (UCSC)NFKBID
Gene fusions - Rearrangements
Fusion : QuiverNFKBID
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerNFKBID [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)NFKBID
dbVarNFKBID
ClinVarNFKBID
MonarchNFKBID
1000_GenomesNFKBID 
Exome Variant ServerNFKBID
GNOMAD BrowserENSG00000167604
Varsome BrowserNFKBID
ACMGNFKBID variants
VarityQ8NI38
Genomic Variants (DGV)NFKBID [DGVbeta]
DECIPHERNFKBID [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisNFKBID 
Mutations
ICGC Data PortalNFKBID 
TCGA Data PortalNFKBID 
Broad Tumor PortalNFKBID
OASIS PortalNFKBID [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICNFKBID  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DNFKBID
Mutations and Diseases : HGMDNFKBID
LOVD (Leiden Open Variation Database)[gene] [transcripts] [variants]
BioMutaNFKBID
DgiDB (Drug Gene Interaction Database)NFKBID
DoCM (Curated mutations)NFKBID
CIViC (Clinical Interpretations of Variants in Cancer)NFKBID
Cancer3DNFKBID
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM618887   
Orphanet
DisGeNETNFKBID
MedgenNFKBID
Genetic Testing Registry NFKBID
NextProtQ8NI38 [Medical]
GENETestsNFKBID
Target ValidationNFKBID
Huge Navigator NFKBID [HugePedia]
ClinGenNFKBID
Clinical trials, drugs, therapy
MyCancerGenomeNFKBID
Protein Interactions : CTDNFKBID
Pharm GKB GenePA162397453
PharosQ8NI38
Clinical trialNFKBID
Miscellaneous
canSAR (ICR)NFKBID
HarmonizomeNFKBID
DataMed IndexNFKBID
Probes
Litterature
PubMed10 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXNFKBID
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Oct 4 16:12:41 CEST 2021

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