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NHSL2 (NHS like 2)

Identity

Other alias-
HGNC (Hugo) NHSL2
LocusID (NCBI) 340527
Atlas_Id 70830
Location Xq13.1  [Link to chromosome band Xq13]
Location_base_pair Starts at 71911088 and ends at 72143574 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)NHSL2   33737
Cards
Entrez_Gene (NCBI)NHSL2  340527  NHS like 2
Aliases
GeneCards (Weizmann)NHSL2
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chrX:71911088-72143574 [Contig_View]  NHSL2 [Vega]
TCGA cBioPortalNHSL2
AceView (NCBI)NHSL2
Genatlas (Paris)NHSL2
WikiGenes340527
SOURCE (Princeton)NHSL2
Genetics Home Reference (NIH)NHSL2
Genomic and cartography
GoldenPath hg38 (UCSC)NHSL2  -     chrX:71911088-72143574 +  Xq13.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)NHSL2  -     Xq13.1   [Description]    (hg19-Feb_2009)
EnsemblNHSL2 - Xq13.1 [CytoView hg19]  NHSL2 - Xq13.1 [CytoView hg38]
Mapping of homologs : NCBINHSL2 [Mapview hg19]  NHSL2 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK054940 AK056217 BC033261 BC136756
RefSeq transcript (Entrez)NM_001013627
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)NHSL2
Cluster EST : UnigeneHs.496303 [ NCBI ]
CGAP (NCI)Hs.496303
Gene ExpressionNHSL2 [ NCBI-GEO ]   NHSL2 [ EBI - ARRAY_EXPRESS ]   NHSL2 [ SEEK ]   NHSL2 [ MEM ]
Gene Expression Viewer (FireBrowse)NHSL2 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)340527
GTEX Portal (Tissue expression)NHSL2
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ5HYW2   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ5HYW2  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ5HYW2
Splice isoforms : SwissVarQ5HYW2
PhosPhoSitePlusQ5HYW2
Domains : Interpro (EBI)NHS_fam   
Domain families : Pfam (Sanger)NHS (PF15273)   
Domain families : Pfam (NCBI)pfam15273   
Conserved Domain (NCBI)NHSL2
DMDM Disease mutations340527
Blocks (Seattle)NHSL2
SuperfamilyQ5HYW2
Peptide AtlasQ5HYW2
HPRD15001
IPIIPI00257910   IPI00967927   
Protein Interaction databases
DIP (DOE-UCLA)Q5HYW2
IntAct (EBI)Q5HYW2
BioGRIDNHSL2
STRING (EMBL)NHSL2
ZODIACNHSL2
Ontologies - Pathways
QuickGOQ5HYW2
Ontology : AmiGOcell differentiation  
Ontology : EGO-EBIcell differentiation  
NDEx NetworkNHSL2
Atlas of Cancer Signalling NetworkNHSL2
Wikipedia pathwaysNHSL2
Orthology - Evolution
OrthoDB340527
Phylogenetic Trees/Animal Genes : TreeFamNHSL2
HOVERGENQ5HYW2
HOGENOMQ5HYW2
Homologs : HomoloGeneNHSL2
Homology/Alignments : Family Browser (UCSC)NHSL2
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerNHSL2 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)NHSL2
dbVarNHSL2
ClinVarNHSL2
1000_GenomesNHSL2 
Exome Variant ServerNHSL2
ExAC (Exome Aggregation Consortium)NHSL2 (select the gene name)
Genetic variants : HAPMAP340527
Genomic Variants (DGV)NHSL2 [DGVbeta]
DECIPHERNHSL2 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisNHSL2 
Mutations
ICGC Data PortalNHSL2 
TCGA Data PortalNHSL2 
Broad Tumor PortalNHSL2
OASIS PortalNHSL2 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICNHSL2  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDNHSL2
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
LOVD (Leiden Open Variation Database)X-chromosome gene database
BioMutasearch NHSL2
DgiDB (Drug Gene Interaction Database)NHSL2
DoCM (Curated mutations)NHSL2 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)NHSL2 (select a term)
intoGenNHSL2
Cancer3DNHSL2(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenNHSL2
Genetic Testing Registry NHSL2
NextProtQ5HYW2 [Medical]
TSGene340527
GENETestsNHSL2
Target ValidationNHSL2
Huge Navigator NHSL2 [HugePedia]
snp3D : Map Gene to Disease340527
BioCentury BCIQNHSL2
ClinGenNHSL2
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD340527
Chemical/Pharm GKB GenePA162397561
Clinical trialNHSL2
Miscellaneous
canSAR (ICR)NHSL2 (select the gene name)
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineNHSL2
EVEXNHSL2
GoPubMedNHSL2
iHOPNHSL2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:32:01 CEST 2017

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