Atlas of Genetics and Cytogenetics in Oncology and Haematology

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NINL (ninein-like)

Identity

Other namesNLP
dJ691N24.1
HGNC (Hugo) NINL
LocusID (NCBI) 22981
Location 20p11.21
Location_base_pair Starts at 25433338 and ends at 25566153 bp from pter ( according to hg19-Feb_2009)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

External links

Nomenclature
HGNC (Hugo)NINL   29163
Entrez_Gene (NCBI)NINL  22981  ninein-like
Cards
GeneCards (Weizmann)NINL
Ensembl (Hinxton)ENSG00000101004 [Gene_View]  chr20:25433338-25566153 [Contig_View]  NINL [Vega]
AceView (NCBI)NINL
Genatlas (Paris)NINL
SOURCE (Stanford)NM_025176
Genomic and cartography
GoldenPath (UCSC)NINL  -  20p11.21   chr20:25433338-25566153 -  20p11.21   [Description]    (hg19-Feb_2009)
EnsemblNINL - 20p11.21 [CytoView]
Mapping of homologs : NCBININL [Mapview]
OMIM609580   
Gene and transcription
Genbank (Entrez)AB023197 AI024623 AK021854 AK093569 AK293991
RefSeq transcript (SRS)NM_025176
RefSeq transcript (Entrez)NM_025176
RefSeq genomic (SRS)AC_000152 NC_000020 NC_018931 NT_011387 NW_001838659 NW_004078100
RefSeq genomic (Entrez)AC_000152 NC_000020 NC_018931 NT_011387 NW_001838659 NW_004078100
Consensus coding sequences : CCDS (NCBI)NINL
Cluster EST : UnigeneHs.631508 [ SRS ] Hs.631508 [ NCBI ]
CGAP (NCI)Hs.631508
Alternative Splicing : Fast-db (Paris)GSHG0019085
Alternative Splicing GalleryENSG00000101004
Gene ExpressionNINL [ NCBI-GEO ]   NINL [ EBI - ARRAY_EXPRESS ]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9Y2I6 (SRS) Q9Y2I6 (Uniprot)
NextProtQ9Y2I6
With graphics : InterProQ9Y2I6
Splice isoforms : SwissVarQ9Y2I6(Swissvar)
Domaine pattern : Prosite (SRS)EF_HAND_1 (PS00018)    EF_HAND_2 (PS50222)   
Domaine pattern : Prosite (Expaxy)EF_HAND_1 (PS00018)    EF_HAND_2 (PS50222)   
Domains : Interpro (SRS)EF-hand-like_dom    EF_Hand_1_Ca_BS    EF_hand_dom   
Domains : Interpro (EBI)EF-hand-like_dom    EF_Hand_1_Ca_BS    EF_hand_dom   
Related proteins : CluSTrQ9Y2I6
Domain families : Pfam (SRS)
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Domain families : Smart (EMBL)EFh (SM00054)  
DMDM22981
Blocks (Seattle)Q9Y2I6
Human Protein AtlasENSG00000101004
HPRD11120
IPIIPI00294173   IPI00028762   IPI00451469   
Protein Interaction databases
DIP (DOE-UCLA)Q9Y2I6
IntAct (EBI)Q9Y2I6
FunCoupENSG00000101004
REACTOMENINL
Protein Interaction Database22981
BioGRIDNINL
InParanoidQ9Y2I6
Interologous Interaction database Q9Y2I6
IntegromeDBNINL
Polymorphism : SNP, mutations, diseases
SNP Single Nucleotide Polymorphism (NCBI)NINL
SNP (GeneSNP Utah)NINL
SNP : HGBaseNINL
Genetic variants : HAPMAPNINL
Somatic Mutations in Cancer : COSMICNINL 
CONAN: Copy Number AnalysisNINL 
Mutations and Diseases : HGMDNINL
OMIM609580   
GENETests609580   
Disease Genetic AssociationNINL
Huge Navigator NINL [HugePedia]  NINL [HugeCancerGEM]
Genomic VariantsNINL  NINL [DGVbeta]
ClinVarNINL
snp3D : Map Gene to Disease22981
General knowledge
Homologs : HomoloGeneNINL
Homology/Alignments : Family Browser (UCSC)NINL
Phylogenetic Trees/Animal Genes : TreeFamNINL
Chemical/Protein Interactions : CTD22981
Chemical/Pharm GKB GenePA165392435
Clinical trialNINL
Cancer Resource (Charite)ENSG00000101004
Ontology : AmiGOG2/M transition of mitotic cell cycle  mitotic cell cycle  calcium ion binding  microtubule organizing center  cytosol  microtubule  
Ontology : EGO-EBIG2/M transition of mitotic cell cycle  mitotic cell cycle  calcium ion binding  microtubule organizing center  cytosol  microtubule  
Other databases
Probes
Litterature
PubMed24 Pubmed reference(s) in Entrez
PubGeneNINL
iHOPNINL
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written09-2002Dessen P, Le Minor S
Updated01-2013Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Fri Jun 14 18:00:52 CEST 2013
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