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NKAIN3 (sodium/potassium transporting ATPase interacting 3)

Identity

Alias_namesFAM77D
family with sequence similarity 77, member D
Alias_symbol (synonym)FLJ39630
Other alias
HGNC (Hugo) NKAIN3
LocusID (NCBI) 286183
Atlas_Id 70846
Location 8q12.3  [Link to chromosome band 8q12]
Location_base_pair Starts at 62248942 and ends at 62966472 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
AC113191.1 () / NKAIN3 (8q12.3)C14orf2 (14q32.33) / NKAIN3 (8q12.3)CXCL12 (10q11.21) / NKAIN3 (8q12.3)
KMT2A (11q23.3) / NKAIN3 (8q12.3)MAP2K3 (17p11.2) / NKAIN3 (8q12.3)NKAIN3 (8q12.3) / SLCO5A1 (8q13.3)
PDE7A (8q13.1) / NKAIN3 (8q12.3)PDE7A NKAIN3C8orf76 NKAIN3
AC113191.1 NKAIN3MAP2K3 NKAIN3

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)NKAIN3   26829
Cards
Entrez_Gene (NCBI)NKAIN3  286183  sodium/potassium transporting ATPase interacting 3
AliasesFAM77D
GeneCards (Weizmann)NKAIN3
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr8:62248942-62966472 [Contig_View]  NKAIN3 [Vega]
TCGA cBioPortalNKAIN3
AceView (NCBI)NKAIN3
Genatlas (Paris)NKAIN3
WikiGenes286183
SOURCE (Princeton)NKAIN3
Genetics Home Reference (NIH)NKAIN3
Genomic and cartography
GoldenPath hg38 (UCSC)NKAIN3  -     chr8:62248942-62966472 +  8q12.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)NKAIN3  -     8q12.3   [Description]    (hg19-Feb_2009)
EnsemblNKAIN3 - 8q12.3 [CytoView hg19]  NKAIN3 - 8q12.3 [CytoView hg38]
Mapping of homologs : NCBINKAIN3 [Mapview hg19]  NKAIN3 [Mapview hg38]
OMIM612872   
Gene and transcription
Genbank (Entrez)AK096949 AK299689 BC146366
RefSeq transcript (Entrez)NM_001304533 NM_173688
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)NKAIN3
Cluster EST : UnigeneHs.654662 [ NCBI ]
CGAP (NCI)Hs.654662
Gene ExpressionNKAIN3 [ NCBI-GEO ]   NKAIN3 [ EBI - ARRAY_EXPRESS ]   NKAIN3 [ SEEK ]   NKAIN3 [ MEM ]
Gene Expression Viewer (FireBrowse)NKAIN3 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)286183
GTEX Portal (Tissue expression)NKAIN3
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8N8D7   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8N8D7  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8N8D7
Splice isoforms : SwissVarQ8N8D7
PhosPhoSitePlusQ8N8D7
Domains : Interpro (EBI)Na/K-Atpase_Interacting   
Domain families : Pfam (Sanger)NKAIN (PF05640)   
Domain families : Pfam (NCBI)pfam05640   
Conserved Domain (NCBI)NKAIN3
DMDM Disease mutations286183
Blocks (Seattle)NKAIN3
SuperfamilyQ8N8D7
Peptide AtlasQ8N8D7
HPRD08261
IPIIPI00167450   IPI01013457   IPI00973770   
Protein Interaction databases
DIP (DOE-UCLA)Q8N8D7
IntAct (EBI)Q8N8D7
BioGRIDNKAIN3
STRING (EMBL)NKAIN3
ZODIACNKAIN3
Ontologies - Pathways
QuickGOQ8N8D7
Ontology : AmiGOregulation of sodium ion transport  plasma membrane  integral component of membrane  
Ontology : EGO-EBIregulation of sodium ion transport  plasma membrane  integral component of membrane  
NDEx NetworkNKAIN3
Atlas of Cancer Signalling NetworkNKAIN3
Wikipedia pathwaysNKAIN3
Orthology - Evolution
OrthoDB286183
Phylogenetic Trees/Animal Genes : TreeFamNKAIN3
HOVERGENQ8N8D7
HOGENOMQ8N8D7
Homologs : HomoloGeneNKAIN3
Homology/Alignments : Family Browser (UCSC)NKAIN3
Gene fusions - Rearrangements
Fusion: TCGAPDE7A NKAIN3
Fusion: TCGAC8orf76 NKAIN3
Fusion: TCGAAC113191.1 NKAIN3
Fusion: TCGAMAP2K3 NKAIN3
Fusion: Tumor Portal NKAIN3
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerNKAIN3 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)NKAIN3
dbVarNKAIN3
ClinVarNKAIN3
1000_GenomesNKAIN3 
Exome Variant ServerNKAIN3
ExAC (Exome Aggregation Consortium)
Genetic variants : HAPMAP286183
Genomic Variants (DGV)NKAIN3 [DGVbeta]
DECIPHERNKAIN3 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisNKAIN3 
Mutations
ICGC Data PortalNKAIN3 
TCGA Data PortalNKAIN3 
Broad Tumor PortalNKAIN3
OASIS PortalNKAIN3 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICNKAIN3  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDNKAIN3
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch NKAIN3
DgiDB (Drug Gene Interaction Database)NKAIN3
DoCM (Curated mutations)NKAIN3 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)NKAIN3 (select a term)
intoGenNKAIN3
Cancer3DNKAIN3(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM612872   
Orphanet
MedgenNKAIN3
Genetic Testing Registry NKAIN3
NextProtQ8N8D7 [Medical]
TSGene286183
GENETestsNKAIN3
Target ValidationNKAIN3
Huge Navigator NKAIN3 [HugePedia]
snp3D : Map Gene to Disease286183
BioCentury BCIQNKAIN3
ClinGenNKAIN3
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD286183
Chemical/Pharm GKB GenePA162397582
Clinical trialNKAIN3
Miscellaneous
canSAR (ICR)NKAIN3 (select the gene name)
Probes
Litterature
PubMed8 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineNKAIN3
EVEXNKAIN3
GoPubMedNKAIN3
iHOPNKAIN3
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Thu Nov 9 12:19:00 CET 2017

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