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NKG7 (natural killer cell granule protein 7)

Identity

Alias_namesnatural killer cell group 7 sequence
Alias_symbol (synonym)GIG1
GMP-17
Other aliasp15-TIA-1
HGNC (Hugo) NKG7
LocusID (NCBI) 4818
Atlas_Id 70851
Location 19q13.41  [Link to chromosome band 19q13]
Location_base_pair Starts at 51371620 and ends at 51372706 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)NKG7   7830
Cards
Entrez_Gene (NCBI)NKG7  4818  natural killer cell granule protein 7
AliasesGIG1; GMP-17; p15-TIA-1
GeneCards (Weizmann)NKG7
Ensembl hg19 (Hinxton)ENSG00000105374 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000105374 [Gene_View]  chr19:51371620-51372706 [Contig_View]  NKG7 [Vega]
ICGC DataPortalENSG00000105374
TCGA cBioPortalNKG7
AceView (NCBI)NKG7
Genatlas (Paris)NKG7
WikiGenes4818
SOURCE (Princeton)NKG7
Genetics Home Reference (NIH)NKG7
Genomic and cartography
GoldenPath hg38 (UCSC)NKG7  -     chr19:51371620-51372706 -  19q13.41   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)NKG7  -     19q13.41   [Description]    (hg19-Feb_2009)
EnsemblNKG7 - 19q13.41 [CytoView hg19]  NKG7 - 19q13.41 [CytoView hg38]
Mapping of homologs : NCBINKG7 [Mapview hg19]  NKG7 [Mapview hg38]
OMIM606008   
Gene and transcription
Genbank (Entrez)AI313472 BC015759 DQ895942 EU176419 S69115
RefSeq transcript (Entrez)NM_005601
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)NKG7
Cluster EST : UnigeneHs.10306 [ NCBI ]
CGAP (NCI)Hs.10306
Alternative Splicing GalleryENSG00000105374
Gene ExpressionNKG7 [ NCBI-GEO ]   NKG7 [ EBI - ARRAY_EXPRESS ]   NKG7 [ SEEK ]   NKG7 [ MEM ]
Gene Expression Viewer (FireBrowse)NKG7 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)4818
GTEX Portal (Tissue expression)NKG7
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ16617   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ16617  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ16617
Splice isoforms : SwissVarQ16617
PhosPhoSitePlusQ16617
Domaine pattern : Prosite (Expaxy)PMP22_1 (PS01221)   
Domains : Interpro (EBI)PMP22/EMP/MP20/Claudin    PMP22_EMP_MP20   
Domain families : Pfam (Sanger)PMP22_Claudin (PF00822)   
Domain families : Pfam (NCBI)pfam00822   
Conserved Domain (NCBI)NKG7
DMDM Disease mutations4818
Blocks (Seattle)NKG7
SuperfamilyQ16617
Human Protein AtlasENSG00000105374
Peptide AtlasQ16617
HPRD16188
IPIIPI00003355   
Protein Interaction databases
DIP (DOE-UCLA)Q16617
IntAct (EBI)Q16617
FunCoupENSG00000105374
BioGRIDNKG7
STRING (EMBL)NKG7
ZODIACNKG7
Ontologies - Pathways
QuickGOQ16617
Ontology : AmiGOprotein binding  integral component of plasma membrane  
Ontology : EGO-EBIprotein binding  integral component of plasma membrane  
NDEx NetworkNKG7
Atlas of Cancer Signalling NetworkNKG7
Wikipedia pathwaysNKG7
Orthology - Evolution
OrthoDB4818
GeneTree (enSembl)ENSG00000105374
Phylogenetic Trees/Animal Genes : TreeFamNKG7
HOVERGENQ16617
HOGENOMQ16617
Homologs : HomoloGeneNKG7
Homology/Alignments : Family Browser (UCSC)NKG7
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerNKG7 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)NKG7
dbVarNKG7
ClinVarNKG7
1000_GenomesNKG7 
Exome Variant ServerNKG7
ExAC (Exome Aggregation Consortium)NKG7 (select the gene name)
Genetic variants : HAPMAP4818
Genomic Variants (DGV)NKG7 [DGVbeta]
DECIPHERNKG7 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisNKG7 
Mutations
ICGC Data PortalNKG7 
TCGA Data PortalNKG7 
Broad Tumor PortalNKG7
OASIS PortalNKG7 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICNKG7  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDNKG7
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch NKG7
DgiDB (Drug Gene Interaction Database)NKG7
DoCM (Curated mutations)NKG7 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)NKG7 (select a term)
intoGenNKG7
Cancer3DNKG7(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM606008   
Orphanet
MedgenNKG7
Genetic Testing Registry NKG7
NextProtQ16617 [Medical]
TSGene4818
GENETestsNKG7
Target ValidationNKG7
Huge Navigator NKG7 [HugePedia]
snp3D : Map Gene to Disease4818
BioCentury BCIQNKG7
ClinGenNKG7
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD4818
Chemical/Pharm GKB GenePA31639
Clinical trialNKG7
Miscellaneous
canSAR (ICR)NKG7 (select the gene name)
Probes
Litterature
PubMed7 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineNKG7
EVEXNKG7
GoPubMedNKG7
iHOPNKG7
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:32:04 CEST 2017

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