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NLGN4Y-AS1 (NLGN4Y antisense RNA 1)

Identity

Alias_namesNLGN4YAS
NLGN4Y-AS
NLGN4Y antisense RNA (non-protein coding)
NLGN4Y antisense RNA 1 (non-protein coding)
Other alias
HGNC (Hugo) NLGN4Y-AS1
LocusID (NCBI) 100874056
Atlas_Id 70867
Location Yq11.221  [Link to chromosome band Yq11]
Location_base_pair Starts at 14793642 and ends at 14804033 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)NLGN4Y-AS1   38793
Cards
Entrez_Gene (NCBI)NLGN4Y-AS1  100874056  NLGN4Y antisense RNA 1
AliasesNLGN4Y-AS; NLGN4YAS
GeneCards (Weizmann)NLGN4Y-AS1
Ensembl hg19 (Hinxton)ENSG00000228787 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000228787 [Gene_View]  chrY:14793642-14804033 [Contig_View]  NLGN4Y-AS1 [Vega]
ICGC DataPortalENSG00000228787
TCGA cBioPortalNLGN4Y-AS1
AceView (NCBI)NLGN4Y-AS1
Genatlas (Paris)NLGN4Y-AS1
WikiGenes100874056
SOURCE (Princeton)NLGN4Y-AS1
Genetics Home Reference (NIH)NLGN4Y-AS1
Genomic and cartography
GoldenPath hg38 (UCSC)NLGN4Y-AS1  -     chrY:14793642-14804033 -  Yq11.221   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)NLGN4Y-AS1  -     Yq11.221   [Description]    (hg19-Feb_2009)
EnsemblNLGN4Y-AS1 - Yq11.221 [CytoView hg19]  NLGN4Y-AS1 - Yq11.221 [CytoView hg38]
Mapping of homologs : NCBINLGN4Y-AS1 [Mapview hg19]  NLGN4Y-AS1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)CN268789
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)NLGN4Y-AS1
Cluster EST : UnigeneHs.743197 [ NCBI ]
CGAP (NCI)Hs.743197
Alternative Splicing GalleryENSG00000228787
Gene ExpressionNLGN4Y-AS1 [ NCBI-GEO ]   NLGN4Y-AS1 [ EBI - ARRAY_EXPRESS ]   NLGN4Y-AS1 [ SEEK ]   NLGN4Y-AS1 [ MEM ]
Gene Expression Viewer (FireBrowse)NLGN4Y-AS1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100874056
GTEX Portal (Tissue expression)NLGN4Y-AS1
Human Protein AtlasENSG00000228787-NLGN4Y-AS1 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)NLGN4Y-AS1
DMDM Disease mutations100874056
Blocks (Seattle)NLGN4Y-AS1
Human Protein Atlas [tissue]ENSG00000228787-NLGN4Y-AS1 [tissue]
Protein Interaction databases
FunCoupENSG00000228787
BioGRIDNLGN4Y-AS1
STRING (EMBL)NLGN4Y-AS1
ZODIACNLGN4Y-AS1
Ontologies - Pathways
Huge Navigator NLGN4Y-AS1 [HugePedia]
snp3D : Map Gene to Disease100874056
BioCentury BCIQNLGN4Y-AS1
ClinGenNLGN4Y-AS1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100874056
Clinical trialNLGN4Y-AS1
Miscellaneous
canSAR (ICR)NLGN4Y-AS1 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineNLGN4Y-AS1
EVEXNLGN4Y-AS1
GoPubMedNLGN4Y-AS1
iHOPNLGN4Y-AS1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 14:01:08 CET 2017

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