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NLRP1 (NLR family pyrin domain containing 1)

Identity

Alias (NCBI)AIADK
CARD7
CIDED
CLR17.1
DEFCAP
DEFCAP-L/S
JRRP
MSPC
NAC
NALP1
PP1044
SLEV1
VAMAS1
HGNC (Hugo) NLRP1
HGNC Alias symbKIAA0926
DKFZp586O1822
CARD7
NAC
CLR17.1
DEFCAP
VAMAS1
HGNC Alias namenucleotide-binding oligomerization domain, leucine rich repeat and pyrin domain containing 1
HGNC Previous nameNALP1
 SLEV1
HGNC Previous nameNACHT, leucine rich repeat and PYD (pyrin domain) containing 1
 systemic lupus erythematosus, vitiligo-related 1
LocusID (NCBI) 22861
Atlas_Id 43368
Location 17p13.2  [Link to chromosome band 17p13]
Location_base_pair Starts at 5514118 and ends at 5584509 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
NLRP1 (17p13.2)::LOC728392 (17p13.2)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

Nomenclature
HGNC (Hugo)NLRP1   14374
Cards
Entrez_Gene (NCBI)NLRP1    NLR family pyrin domain containing 1
AliasesAIADK; CARD7; CIDED; CLR17.1; 
DEFCAP; DEFCAP-L/S; JRRP; MSPC; NAC; NALP1; PP1044; SLEV1; VAMAS1
GeneCards (Weizmann)NLRP1
Ensembl hg19 (Hinxton)ENSG00000091592 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000091592 [Gene_View]  ENSG00000091592 [Sequence]  chr17:5514118-5584509 [Contig_View]  NLRP1 [Vega]
ICGC DataPortalENSG00000091592
TCGA cBioPortalNLRP1
AceView (NCBI)NLRP1
Genatlas (Paris)NLRP1
SOURCE (Princeton)NLRP1
Genetics Home Reference (NIH)NLRP1
Genomic and cartography
GoldenPath hg38 (UCSC)NLRP1  -     chr17:5514118-5584509 -  17p13.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)NLRP1  -     17p13.2   [Description]    (hg19-Feb_2009)
GoldenPathNLRP1 - 17p13.2 [CytoView hg19]  NLRP1 - 17p13.2 [CytoView hg38]
ImmunoBaseENSG00000091592
Genome Data Viewer NCBINLRP1 [Mapview hg19]  
OMIM606579   606636   615225   617388   618803   
Gene and transcription
Genbank (Entrez)AB023143 AF229059 AF229060 AF229061 AF229062
RefSeq transcript (Entrez)NM_001033053 NM_014922 NM_033004 NM_033006 NM_033007
Consensus coding sequences : CCDS (NCBI)NLRP1
Gene ExpressionNLRP1 [ NCBI-GEO ]   NLRP1 [ EBI - ARRAY_EXPRESS ]   NLRP1 [ SEEK ]   NLRP1 [ MEM ]
Gene Expression Viewer (FireBrowse)NLRP1 [ Firebrowse - Broad ]
GenevisibleExpression of NLRP1 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)22861
GTEX Portal (Tissue expression)NLRP1
Human Protein AtlasENSG00000091592-NLRP1 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)NLRP1
Human Protein Atlas [tissue]ENSG00000091592-NLRP1 [tissue]
HPRD07364
Protein Interaction databases
BioGRIDNLRP1
STRING (EMBL)NLRP1
ZODIACNLRP1
Ontologies - Pathways
Litterature
PubMed143 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXNLRP1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Sun Jan 16 18:24:55 CET 2022

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