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NMB (neuromedin B)

Identity

Alias_symbol (synonym)MGC2277
MGC3936
MGC17211
Other alias-
HGNC (Hugo) NMB
LocusID (NCBI) 4828
Atlas_Id 56029
Location 15q25.2  [Link to chromosome band 15q25]
Location_base_pair Starts at 84655129 and ends at 84658571 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
NMB (15q25.2) / ZNF35 (3p21.31)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)NMB   7842
Cards
Entrez_Gene (NCBI)NMB  4828  neuromedin B
Aliases
GeneCards (Weizmann)NMB
Ensembl hg19 (Hinxton)ENSG00000197696 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000197696 [Gene_View]  chr15:84655129-84658571 [Contig_View]  NMB [Vega]
ICGC DataPortalENSG00000197696
TCGA cBioPortalNMB
AceView (NCBI)NMB
Genatlas (Paris)NMB
WikiGenes4828
SOURCE (Princeton)NMB
Genetics Home Reference (NIH)NMB
Genomic and cartography
GoldenPath hg38 (UCSC)NMB  -     chr15:84655129-84658571 -  15q25.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)NMB  -     15q25.2   [Description]    (hg19-Feb_2009)
EnsemblNMB - 15q25.2 [CytoView hg19]  NMB - 15q25.2 [CytoView hg38]
Mapping of homologs : NCBINMB [Mapview hg19]  NMB [Mapview hg38]
OMIM162340   
Gene and transcription
Genbank (Entrez)AL110112 BC007407 BC007431 BC008603 BI858080
RefSeq transcript (Entrez)NM_021077 NM_205858
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)NMB
Cluster EST : UnigeneHs.386470 [ NCBI ]
CGAP (NCI)Hs.386470
Alternative Splicing GalleryENSG00000197696
Gene ExpressionNMB [ NCBI-GEO ]   NMB [ EBI - ARRAY_EXPRESS ]   NMB [ SEEK ]   NMB [ MEM ]
Gene Expression Viewer (FireBrowse)NMB [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)4828
GTEX Portal (Tissue expression)NMB
Protein : pattern, domain, 3D structure
UniProt/SwissProtP08949   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtP08949  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProP08949
Splice isoforms : SwissVarP08949
PhosPhoSitePlusP08949
Domaine pattern : Prosite (Expaxy)BOMBESIN (PS00257)   
Domains : Interpro (EBI)Bombesin   
Domain families : Pfam (Sanger)Bombesin (PF02044)   
Domain families : Pfam (NCBI)pfam02044   
Conserved Domain (NCBI)NMB
DMDM Disease mutations4828
Blocks (Seattle)NMB
PDB (SRS)1C98    1C9A   
PDB (PDBSum)1C98    1C9A   
PDB (IMB)1C98    1C9A   
PDB (RSDB)1C98    1C9A   
Structural Biology KnowledgeBase1C98    1C9A   
SCOP (Structural Classification of Proteins)1C98    1C9A   
CATH (Classification of proteins structures)1C98    1C9A   
SuperfamilyP08949
Human Protein AtlasENSG00000197696
Peptide AtlasP08949
HPRD01210
IPIIPI00031753   IPI00220630   
Protein Interaction databases
DIP (DOE-UCLA)P08949
IntAct (EBI)P08949
FunCoupENSG00000197696
BioGRIDNMB
STRING (EMBL)NMB
ZODIACNMB
Ontologies - Pathways
QuickGOP08949
Ontology : AmiGOhormone activity  protein binding  extracellular region  signal transduction  positive regulation of cytosolic calcium ion concentration  neuropeptide signaling pathway  cell-cell signaling  positive regulation of cell proliferation  neuromedin B receptor binding  glucose homeostasis  neuron projection  positive regulation of hormone secretion  negative regulation of hormone secretion  arachidonic acid secretion  
Ontology : EGO-EBIhormone activity  protein binding  extracellular region  signal transduction  positive regulation of cytosolic calcium ion concentration  neuropeptide signaling pathway  cell-cell signaling  positive regulation of cell proliferation  neuromedin B receptor binding  glucose homeostasis  neuron projection  positive regulation of hormone secretion  negative regulation of hormone secretion  arachidonic acid secretion  
NDEx NetworkNMB
Atlas of Cancer Signalling NetworkNMB
Wikipedia pathwaysNMB
Orthology - Evolution
OrthoDB4828
GeneTree (enSembl)ENSG00000197696
Phylogenetic Trees/Animal Genes : TreeFamNMB
HOVERGENP08949
HOGENOMP08949
Homologs : HomoloGeneNMB
Homology/Alignments : Family Browser (UCSC)NMB
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerNMB [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)NMB
dbVarNMB
ClinVarNMB
1000_GenomesNMB 
Exome Variant ServerNMB
ExAC (Exome Aggregation Consortium)NMB (select the gene name)
Genetic variants : HAPMAP4828
Genomic Variants (DGV)NMB [DGVbeta]
DECIPHERNMB [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisNMB 
Mutations
ICGC Data PortalNMB 
TCGA Data PortalNMB 
Broad Tumor PortalNMB
OASIS PortalNMB [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICNMB  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDNMB
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch NMB
DgiDB (Drug Gene Interaction Database)NMB
DoCM (Curated mutations)NMB (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)NMB (select a term)
intoGenNMB
Cancer3DNMB(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM162340   
Orphanet
MedgenNMB
Genetic Testing Registry NMB
NextProtP08949 [Medical]
TSGene4828
GENETestsNMB
Huge Navigator NMB [HugePedia]
snp3D : Map Gene to Disease4828
BioCentury BCIQNMB
ClinGenNMB
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD4828
Chemical/Pharm GKB GenePA31654
Clinical trialNMB
Miscellaneous
canSAR (ICR)NMB (select the gene name)
Probes
Litterature
PubMed29 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineNMB
EVEXNMB
GoPubMedNMB
iHOPNMB
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Fri May 19 12:28:48 CEST 2017

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