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NMBR (neuromedin B receptor)

Identity

Alias_symbol (synonym)BB1
BB1R
Other aliasNMB-R
HGNC (Hugo) NMBR
LocusID (NCBI) 4829
Atlas_Id 56259
Location 6q24.1  [Link to chromosome band 6q24]
Location_base_pair Starts at 142074484 and ends at 142147105 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)NMBR   7843
Cards
Entrez_Gene (NCBI)NMBR  4829  neuromedin B receptor
AliasesBB1; BB1R; NMB-R
GeneCards (Weizmann)NMBR
Ensembl hg19 (Hinxton)ENSG00000135577 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000135577 [Gene_View]  chr6:142074484-142147105 [Contig_View]  NMBR [Vega]
ICGC DataPortalENSG00000135577
TCGA cBioPortalNMBR
AceView (NCBI)NMBR
Genatlas (Paris)NMBR
WikiGenes4829
SOURCE (Princeton)NMBR
Genetics Home Reference (NIH)NMBR
Genomic and cartography
GoldenPath hg38 (UCSC)NMBR  -     chr6:142074484-142147105 -  6q24.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)NMBR  -     6q24.1   [Description]    (hg19-Feb_2009)
EnsemblNMBR - 6q24.1 [CytoView hg19]  NMBR - 6q24.1 [CytoView hg38]
Mapping of homologs : NCBINMBR [Mapview hg19]  NMBR [Mapview hg38]
OMIM162341   
Gene and transcription
Genbank (Entrez)BC095542 BX111967 DB462076 GU727635 M73482
RefSeq transcript (Entrez)NM_001324307 NM_001324308 NM_002511
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)NMBR
Cluster EST : UnigeneHs.654478 [ NCBI ]
CGAP (NCI)Hs.654478
Alternative Splicing GalleryENSG00000135577
Gene ExpressionNMBR [ NCBI-GEO ]   NMBR [ EBI - ARRAY_EXPRESS ]   NMBR [ SEEK ]   NMBR [ MEM ]
Gene Expression Viewer (FireBrowse)NMBR [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)4829
GTEX Portal (Tissue expression)NMBR
Human Protein AtlasENSG00000135577-NMBR [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtP28336   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtP28336  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProP28336
Splice isoforms : SwissVarP28336
PhosPhoSitePlusP28336
Domaine pattern : Prosite (Expaxy)G_PROTEIN_RECEP_F1_1 (PS00237)    G_PROTEIN_RECEP_F1_2 (PS50262)   
Domains : Interpro (EBI)Bombsn_rcpt-like    GPCR_Rhodpsn    GPCR_Rhodpsn_7TM    NeuroB_rcpt   
Domain families : Pfam (Sanger)7tm_1 (PF00001)   
Domain families : Pfam (NCBI)pfam00001   
Domain families : Smart (EMBL)7TM_GPCR_Srsx (SM01381)  
Conserved Domain (NCBI)NMBR
DMDM Disease mutations4829
Blocks (Seattle)NMBR
SuperfamilyP28336
Human Protein Atlas [tissue]ENSG00000135577-NMBR [tissue]
Peptide AtlasP28336
HPRD01211
IPIIPI00002878   
Protein Interaction databases
DIP (DOE-UCLA)P28336
IntAct (EBI)P28336
FunCoupENSG00000135577
BioGRIDNMBR
STRING (EMBL)NMBR
ZODIACNMBR
Ontologies - Pathways
QuickGOP28336
Ontology : AmiGObombesin receptor activity  cytosol  plasma membrane  plasma membrane  integral component of plasma membrane  G-protein coupled receptor signaling pathway  phospholipase C-activating G-protein coupled receptor signaling pathway  bombesin receptor signaling pathway  
Ontology : EGO-EBIbombesin receptor activity  cytosol  plasma membrane  plasma membrane  integral component of plasma membrane  G-protein coupled receptor signaling pathway  phospholipase C-activating G-protein coupled receptor signaling pathway  bombesin receptor signaling pathway  
Pathways : KEGGNeuroactive ligand-receptor interaction   
NDEx NetworkNMBR
Atlas of Cancer Signalling NetworkNMBR
Wikipedia pathwaysNMBR
Orthology - Evolution
OrthoDB4829
GeneTree (enSembl)ENSG00000135577
Phylogenetic Trees/Animal Genes : TreeFamNMBR
HOVERGENP28336
HOGENOMP28336
Homologs : HomoloGeneNMBR
Homology/Alignments : Family Browser (UCSC)NMBR
Gene fusions - Rearrangements
Tumor Fusion PortalNMBR
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerNMBR [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)NMBR
dbVarNMBR
ClinVarNMBR
1000_GenomesNMBR 
Exome Variant ServerNMBR
ExAC (Exome Aggregation Consortium)ENSG00000135577
GNOMAD BrowserENSG00000135577
Genetic variants : HAPMAP4829
Genomic Variants (DGV)NMBR [DGVbeta]
DECIPHERNMBR [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisNMBR 
Mutations
ICGC Data PortalNMBR 
TCGA Data PortalNMBR 
Broad Tumor PortalNMBR
OASIS PortalNMBR [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICNMBR  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDNMBR
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch NMBR
DgiDB (Drug Gene Interaction Database)NMBR
DoCM (Curated mutations)NMBR (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)NMBR (select a term)
intoGenNMBR
Cancer3DNMBR(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM162341   
Orphanet
DisGeNETNMBR
MedgenNMBR
Genetic Testing Registry NMBR
NextProtP28336 [Medical]
TSGene4829
GENETestsNMBR
Target ValidationNMBR
Huge Navigator NMBR [HugePedia]
snp3D : Map Gene to Disease4829
BioCentury BCIQNMBR
ClinGenNMBR
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD4829
Chemical/Pharm GKB GenePA31655
Clinical trialNMBR
Miscellaneous
canSAR (ICR)NMBR (select the gene name)
Probes
Litterature
PubMed56 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineNMBR
EVEXNMBR
GoPubMedNMBR
iHOPNMBR
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

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indexed on : Tue Nov 21 14:26:23 CET 2017

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