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NME7 (NME/NM23 family member 7)

Identity

Alias_namesnon-metastatic cells 7, protein expressed in (nucleoside-diphosphate kinase)
Alias_symbol (synonym)FLJ37194
NM23-H7
CFAP67
Other aliasMN23H7
NDK 7
NDK7
nm23-H7
HGNC (Hugo) NME7
LocusID (NCBI) 29922
Atlas_Id 70885
Location 1q24.2  [Link to chromosome band 1q24]
Location_base_pair Starts at 169101768 and ends at 169337201 bp from pter ( according to hg19-Feb_2009)
Fusion genes
(updated 2016)
ALDH9A1 (1q24.1) / NME7 (1q24.2)DCAF8 (1q23.2) / NME7 (1q24.2)NME7 (1q24.2) / KMO (1q43)
RBM3 (Xp11.23) / NME7 (1q24.2)ZNF672 (1q44) / NME7 (1q24.2)ALDH9A1 NME7
DCAF8 NME7

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)NME7   20461
Cards
Entrez_Gene (NCBI)NME7  29922  NME/NM23 family member 7
AliasesCFAP67; MN23H7; NDK; NDK7; 
nm23-H7
GeneCards (Weizmann)NME7
Ensembl hg19 (Hinxton)ENSG00000143156 [Gene_View]  chr1:169101768-169337201 [Contig_View]  NME7 [Vega]
Ensembl hg38 (Hinxton)ENSG00000143156 [Gene_View]  chr1:169101768-169337201 [Contig_View]  NME7 [Vega]
ICGC DataPortalENSG00000143156
TCGA cBioPortalNME7
AceView (NCBI)NME7
Genatlas (Paris)NME7
WikiGenes29922
SOURCE (Princeton)NME7
Genetics Home Reference (NIH)NME7
Genomic and cartography
GoldenPath hg19 (UCSC)NME7  -     chr1:169101768-169337201 -  1q24.2   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)NME7  -     1q24.2   [Description]    (hg38-Dec_2013)
EnsemblNME7 - 1q24.2 [CytoView hg19]  NME7 - 1q24.2 [CytoView hg38]
Mapping of homologs : NCBINME7 [Mapview hg19]  NME7 [Mapview hg38]
OMIM613465   
Gene and transcription
Genbank (Entrez)AB209049 AF153191 AK094513 AK290701 AK301917
RefSeq transcript (Entrez)NM_013330 NM_197972
RefSeq genomic (Entrez)NC_000001 NC_018912 NT_004487 NW_004929293
Consensus coding sequences : CCDS (NCBI)NME7
Cluster EST : UnigeneHs.706952 [ NCBI ]
CGAP (NCI)Hs.706952
Alternative Splicing GalleryENSG00000143156
Gene ExpressionNME7 [ NCBI-GEO ]   NME7 [ EBI - ARRAY_EXPRESS ]   NME7 [ SEEK ]   NME7 [ MEM ]
Gene Expression Viewer (FireBrowse)NME7 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)29922
GTEX Portal (Tissue expression)NME7
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9Y5B8   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9Y5B8  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9Y5B8
Splice isoforms : SwissVarQ9Y5B8
Catalytic activity : Enzyme2.7.4.6 [ Enzyme-Expasy ]   2.7.4.62.7.4.6 [ IntEnz-EBI ]   2.7.4.6 [ BRENDA ]   2.7.4.6 [ KEGG ]   
PhosPhoSitePlusQ9Y5B8
Domaine pattern : Prosite (Expaxy)DM10 (PS51336)   
Domains : Interpro (EBI)NDK7    Nucleoside_diP_kinase    Uncharacterised_DM10   
Domain families : Pfam (Sanger)NDK (PF00334)   
Domain families : Pfam (NCBI)pfam00334   
Domain families : Smart (EMBL)DM10 (SM00676)  NDK (SM00562)  
Conserved Domain (NCBI)NME7
DMDM Disease mutations29922
Blocks (Seattle)NME7
SuperfamilyQ9Y5B8
Human Protein AtlasENSG00000143156
Peptide AtlasQ9Y5B8
HPRD11394
IPIIPI00294997   IPI00377134   IPI00984848   IPI00555922   
Protein Interaction databases
DIP (DOE-UCLA)Q9Y5B8
IntAct (EBI)Q9Y5B8
FunCoupENSG00000143156
BioGRIDNME7
STRING (EMBL)NME7
ZODIACNME7
Ontologies - Pathways
QuickGOQ9Y5B8
Ontology : AmiGOepithelial cilium movement  nucleoside diphosphate kinase activity  protein binding  ATP binding  intracellular  centrosome  nucleoside diphosphate phosphorylation  GTP biosynthetic process  UTP biosynthetic process  CTP biosynthetic process  determination of left/right symmetry  brain development  ciliary basal body  intraciliary transport  metal ion binding  ciliary receptor clustering involved in smoothened signaling pathway  left/right pattern formation  
Ontology : EGO-EBIepithelial cilium movement  nucleoside diphosphate kinase activity  protein binding  ATP binding  intracellular  centrosome  nucleoside diphosphate phosphorylation  GTP biosynthetic process  UTP biosynthetic process  CTP biosynthetic process  determination of left/right symmetry  brain development  ciliary basal body  intraciliary transport  metal ion binding  ciliary receptor clustering involved in smoothened signaling pathway  left/right pattern formation  
Pathways : KEGGPurine metabolism    Pyrimidine metabolism   
NDEx NetworkNME7
Atlas of Cancer Signalling NetworkNME7
Wikipedia pathwaysNME7
Orthology - Evolution
OrthoDB29922
GeneTree (enSembl)ENSG00000143156
Phylogenetic Trees/Animal Genes : TreeFamNME7
HOVERGENQ9Y5B8
HOGENOMQ9Y5B8
Homologs : HomoloGeneNME7
Homology/Alignments : Family Browser (UCSC)NME7
Gene fusions - Rearrangements
Fusion: TCGAALDH9A1 NME7
Fusion: TCGADCAF8 NME7
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerNME7 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)NME7
dbVarNME7
ClinVarNME7
1000_GenomesNME7 
Exome Variant ServerNME7
ExAC (Exome Aggregation Consortium)NME7 (select the gene name)
Genetic variants : HAPMAP29922
Genomic Variants (DGV)NME7 [DGVbeta]
DECIPHER (Syndromes)1:169101768-169337201  ENSG00000143156
CONAN: Copy Number AnalysisNME7 
Mutations
ICGC Data PortalNME7 
TCGA Data PortalNME7 
Broad Tumor PortalNME7
OASIS PortalNME7 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICNME7  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDNME7
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch NME7
DgiDB (Drug Gene Interaction Database)NME7
DoCM (Curated mutations)NME7 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)NME7 (select a term)
intoGenNME7
Cancer3DNME7(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM613465   
Orphanet
MedgenNME7
Genetic Testing Registry NME7
NextProtQ9Y5B8 [Medical]
TSGene29922
GENETestsNME7
Huge Navigator NME7 [HugePedia]
snp3D : Map Gene to Disease29922
BioCentury BCIQNME7
ClinGenNME7
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD29922
Chemical/Pharm GKB GenePA134962167
Clinical trialNME7
Miscellaneous
canSAR (ICR)NME7 (select the gene name)
Probes
Litterature
PubMed28 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineNME7
EVEXNME7
GoPubMedNME7
iHOPNME7
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 12:35:04 CET 2017

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