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NME9 (NME/NM23 family member 9)

Identity

Alias (NCBI)NM23-H9
NXL2
TXL-2
TXL2
TXNDC6
HGNC (Hugo) NME9
HGNC Alias symbTXL-2
NM23-H9
HGNC Previous nameTXNDC6
HGNC Previous namethioredoxin domain containing 6
 NME gene family member 9
 NME family member 9
LocusID (NCBI) 347736
Atlas_Id 53822
Location 3q22.3  [Link to chromosome band 3q22]
Location_base_pair Starts at 138261436 and ends at 138329851 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
ZBTB25 (14q23.3) / NME9 (3q22.3)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

 

Nomenclature
HGNC (Hugo)NME9   21343
Cards
Entrez_Gene (NCBI)NME9    NME/NM23 family member 9
AliasesNM23-H9; NXL2; TXL-2; TXL2; 
TXNDC6
GeneCards (Weizmann)NME9
Ensembl hg19 (Hinxton)ENSG00000181322 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000181322 [Gene_View]  ENSG00000181322 [Sequence]  chr3:138261436-138329851 [Contig_View]  NME9 [Vega]
ICGC DataPortalENSG00000181322
TCGA cBioPortalNME9
AceView (NCBI)NME9
Genatlas (Paris)NME9
SOURCE (Princeton)NME9
Genetics Home Reference (NIH)NME9
Genomic and cartography
GoldenPath hg38 (UCSC)NME9  -     chr3:138261436-138329851 -  3q22.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)NME9  -     3q22.3   [Description]    (hg19-Feb_2009)
GoldenPathNME9 - 3q22.3 [CytoView hg19]  NME9 - 3q22.3 [CytoView hg38]
ImmunoBaseENSG00000181322
Genome Data Viewer NCBINME9 [Mapview hg19]  
OMIM618584   
Gene and transcription
Genbank (Entrez)AF196568 AK094830 AY336746 BC107054
RefSeq transcript (Entrez)NM_001349018 NM_001349020 NM_001349021 NM_001349022 NM_001349023 NM_001349024 NM_001349025 NM_178130
Consensus coding sequences : CCDS (NCBI)NME9
Gene ExpressionNME9 [ NCBI-GEO ]   NME9 [ EBI - ARRAY_EXPRESS ]   NME9 [ SEEK ]   NME9 [ MEM ]
Gene Expression Viewer (FireBrowse)NME9 [ Firebrowse - Broad ]
GenevisibleExpression of NME9 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)347736
GTEX Portal (Tissue expression)NME9
Human Protein AtlasENSG00000181322-NME9 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ86XW9   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ86XW9  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ86XW9
PhosPhoSitePlusQ86XW9
Domaine pattern : Prosite (Expaxy)THIOREDOXIN_1 (PS00194)   
Domains : Interpro (EBI)NDK-like_dom    NDK-like_dom_sf    Nucleoside_diP_kinase    Thioredoxin-like_sf    Thioredoxin_CS    Thioredoxin_domain   
Domain families : Pfam (Sanger)NDK (PF00334)    Thioredoxin (PF00085)   
Domain families : Pfam (NCBI)pfam00334    pfam00085   
Domain families : Smart (EMBL)NDK (SM00562)  
Conserved Domain (NCBI)NME9
SuperfamilyQ86XW9
AlphaFold pdb e-kbQ86XW9   
Human Protein Atlas [tissue]ENSG00000181322-NME9 [tissue]
HPRD18250
Protein Interaction databases
DIP (DOE-UCLA)Q86XW9
IntAct (EBI)Q86XW9
BioGRIDNME9
STRING (EMBL)NME9
ZODIACNME9
Ontologies - Pathways
QuickGOQ86XW9
Ontology : AmiGOnucleoside diphosphate kinase activity  cytoskeleton  nucleoside diphosphate phosphorylation  GTP biosynthetic process  UTP biosynthetic process  CTP biosynthetic process  cell projection  dynein axonemal particle  
Ontology : EGO-EBInucleoside diphosphate kinase activity  cytoskeleton  nucleoside diphosphate phosphorylation  GTP biosynthetic process  UTP biosynthetic process  CTP biosynthetic process  cell projection  dynein axonemal particle  
NDEx NetworkNME9
Atlas of Cancer Signalling NetworkNME9
Wikipedia pathwaysNME9
Orthology - Evolution
OrthoDB347736
GeneTree (enSembl)ENSG00000181322
Phylogenetic Trees/Animal Genes : TreeFamNME9
Homologs : HomoloGeneNME9
Homology/Alignments : Family Browser (UCSC)NME9
Gene fusions - Rearrangements
Fusion : QuiverNME9
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerNME9 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)NME9
dbVarNME9
ClinVarNME9
MonarchNME9
1000_GenomesNME9 
Exome Variant ServerNME9
GNOMAD BrowserENSG00000181322
Varsome BrowserNME9
ACMGNME9 variants
VarityQ86XW9
Genomic Variants (DGV)NME9 [DGVbeta]
DECIPHERNME9 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisNME9 
Mutations
ICGC Data PortalNME9 
TCGA Data PortalNME9 
Broad Tumor PortalNME9
OASIS PortalNME9 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICNME9  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DNME9
Mutations and Diseases : HGMDNME9
LOVD (Leiden Open Variation Database)[gene] [transcripts] [variants]
BioMutaNME9
DgiDB (Drug Gene Interaction Database)NME9
DoCM (Curated mutations)NME9
CIViC (Clinical Interpretations of Variants in Cancer)NME9
Cancer3DNME9
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM618584   
Orphanet
DisGeNETNME9
MedgenNME9
Genetic Testing Registry NME9
NextProtQ86XW9 [Medical]
GENETestsNME9
Target ValidationNME9
Huge Navigator NME9 [HugePedia]
ClinGenNME9
Clinical trials, drugs, therapy
MyCancerGenomeNME9
Protein Interactions : CTDNME9
Pharm GKB GenePA134909407
PharosQ86XW9
Clinical trialNME9
Miscellaneous
canSAR (ICR)NME9
HarmonizomeNME9
DataMed IndexNME9
Probes
Litterature
PubMed10 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXNME9
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Oct 4 15:22:56 CEST 2021

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