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NMI (N-myc and STAT interactor)

Identity

Alias (NCBI)-
HGNC (Hugo) NMI
HGNC Previous nameN-myc (and STAT) interactor
LocusID (NCBI) 9111
Atlas_Id 41549
Location 2q23.3  [Link to chromosome band 2q23]
Location_base_pair Starts at 151270470 and ends at 151289668 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
IFITM2 (11p15.5) / NMI (2q23.3)PPHLN1 (12q12) / NMI (2q23.3)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

 

Nomenclature
HGNC (Hugo)NMI   7854
Cards
Entrez_Gene (NCBI)NMI    N-myc and STAT interactor
Aliases
GeneCards (Weizmann)NMI
Ensembl hg19 (Hinxton)ENSG00000123609 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000123609 [Gene_View]  ENSG00000123609 [Sequence]  chr2:151270470-151289668 [Contig_View]  NMI [Vega]
ICGC DataPortalENSG00000123609
TCGA cBioPortalNMI
AceView (NCBI)NMI
Genatlas (Paris)NMI
SOURCE (Princeton)NMI
Genetics Home Reference (NIH)NMI
Genomic and cartography
GoldenPath hg38 (UCSC)NMI  -     chr2:151270470-151289668 -  2q23.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)NMI  -     2q23.3   [Description]    (hg19-Feb_2009)
GoldenPathNMI - 2q23.3 [CytoView hg19]  NMI - 2q23.3 [CytoView hg38]
ImmunoBaseENSG00000123609
Genome Data Viewer NCBINMI [Mapview hg19]  
OMIM603525   
Gene and transcription
Genbank (Entrez)AB451305 AB451436 AK124323 AK291548 AK298754
RefSeq transcript (Entrez)NM_004688
Consensus coding sequences : CCDS (NCBI)NMI
Gene ExpressionNMI [ NCBI-GEO ]   NMI [ EBI - ARRAY_EXPRESS ]   NMI [ SEEK ]   NMI [ MEM ]
Gene Expression Viewer (FireBrowse)NMI [ Firebrowse - Broad ]
GenevisibleExpression of NMI in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)9111
GTEX Portal (Tissue expression)NMI
Human Protein AtlasENSG00000123609-NMI [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ13287   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ13287  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ13287
PhosPhoSitePlusQ13287
Domains : Interpro (EBI)NMI    Nmi/IFP35_dom    Nmi/IFP35_N    Nucleotide-bd_a/b_plait_sf   
Domain families : Pfam (Sanger)IFP_35_N (PF07334)    NID (PF07292)   
Domain families : Pfam (NCBI)pfam07334    pfam07292   
Conserved Domain (NCBI)NMI
SuperfamilyQ13287
AlphaFold pdb e-kbQ13287   
Human Protein Atlas [tissue]ENSG00000123609-NMI [tissue]
HPRD04632
Protein Interaction databases
DIP (DOE-UCLA)Q13287
IntAct (EBI)Q13287
BioGRIDNMI
STRING (EMBL)NMI
ZODIACNMI
Ontologies - Pathways
QuickGOQ13287
Ontology : AmiGOmacrophage activation involved in immune response  transcription coregulator activity  protein binding  extracellular space  nucleus  nucleoplasm  cytoplasm  cytoplasm  cytosol  regulation of transcription, DNA-templated  transcription by RNA polymerase II  receptor signaling pathway via JAK-STAT  negative regulation of cell population proliferation  response to virus  membrane  negative regulation of interferon-alpha production  negative regulation of interferon-beta production  toll-like receptor 4 signaling pathway  identical protein binding  positive regulation of innate immune response  negative regulation of innate immune response  positive regulation of inflammatory response  interferon-gamma-mediated signaling pathway  negative regulation of NIK/NF-kappaB signaling  positive regulation of NIK/NF-kappaB signaling  positive regulation of protein K48-linked ubiquitination  
Ontology : EGO-EBImacrophage activation involved in immune response  transcription coregulator activity  protein binding  extracellular space  nucleus  nucleoplasm  cytoplasm  cytoplasm  cytosol  regulation of transcription, DNA-templated  transcription by RNA polymerase II  receptor signaling pathway via JAK-STAT  negative regulation of cell population proliferation  response to virus  membrane  negative regulation of interferon-alpha production  negative regulation of interferon-beta production  toll-like receptor 4 signaling pathway  identical protein binding  positive regulation of innate immune response  negative regulation of innate immune response  positive regulation of inflammatory response  interferon-gamma-mediated signaling pathway  negative regulation of NIK/NF-kappaB signaling  positive regulation of NIK/NF-kappaB signaling  positive regulation of protein K48-linked ubiquitination  
Pathways : BIOCARTAIL-7 Signal Transduction [Genes]    IL-2 Receptor Beta Chain in T cell Activation [Genes]   
NDEx NetworkNMI
Atlas of Cancer Signalling NetworkNMI
Wikipedia pathwaysNMI
Orthology - Evolution
OrthoDB9111
GeneTree (enSembl)ENSG00000123609
Phylogenetic Trees/Animal Genes : TreeFamNMI
Homologs : HomoloGeneNMI
Homology/Alignments : Family Browser (UCSC)NMI
Gene fusions - Rearrangements
Fusion : QuiverNMI
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerNMI [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)NMI
dbVarNMI
ClinVarNMI
MonarchNMI
1000_GenomesNMI 
Exome Variant ServerNMI
GNOMAD BrowserENSG00000123609
Varsome BrowserNMI
ACMGNMI variants
VarityQ13287
Genomic Variants (DGV)NMI [DGVbeta]
DECIPHERNMI [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisNMI 
Mutations
ICGC Data PortalNMI 
TCGA Data PortalNMI 
Broad Tumor PortalNMI
OASIS PortalNMI [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICNMI  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DNMI
Mutations and Diseases : HGMDNMI
LOVD (Leiden Open Variation Database)[gene] [transcripts] [variants]
BioMutaNMI
DgiDB (Drug Gene Interaction Database)NMI
DoCM (Curated mutations)NMI
CIViC (Clinical Interpretations of Variants in Cancer)NMI
Cancer3DNMI
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM603525   
Orphanet
DisGeNETNMI
MedgenNMI
Genetic Testing Registry NMI
NextProtQ13287 [Medical]
GENETestsNMI
Target ValidationNMI
Huge Navigator NMI [HugePedia]
ClinGenNMI
Clinical trials, drugs, therapy
MyCancerGenomeNMI
Protein Interactions : CTDNMI
Pharm GKB GenePA31659
PharosQ13287
Clinical trialNMI
Miscellaneous
canSAR (ICR)NMI
HarmonizomeNMI
DataMed IndexNMI
Probes
Litterature
PubMed72 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXNMI
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Oct 4 15:22:57 CEST 2021

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